Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq332 95.1 3e-14 >seq332 Length=679357 Score = 95.1 bits (104), Expect = 3e-14 Identities = 213/317 (67%), Gaps = 5/317 (2%) Strand=Plus/Minus Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA--- 110745 |||| ||| | | |||| |||| |||| || ||||| | || ||||| || | Sbjct 209908 TTCCTATGCTCCGTGTCTACAACAACACCGCCCGTTATGTCGACCAGGGTGGCAACAAGC 209849 Query 110746 GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805 | ||| | ||||| ||||| ||||| || ||||| | || | |||| ||| | | Sbjct 209848 GCCCTGGTGCTTTTGCCATCTACCTCGAGCCGTGGCACGCTGACGTCTTTGGCTTCCTCG 209789 Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865 | || | || || || || || || | || || ||| | || ||||| ||| Sbjct 209788 ACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCGTGCTCGCGATCTCTTCTATGCTTTGT 209729 Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925 ||||| | ||| | |||||| | ||||| ||||| || ||| |||| | |||||||||| Sbjct 209728 GGATTCCCGATCTCTTCATGCAGCGTGTGCAAGAGAACGGCGAGTGGACCCTTATGTGTC 209669 Query 110926 CTCATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984 | || || | ||||| || |||| || || || | ||||| | | ||||||||| Sbjct 209668 C-CAACGAGTGCCCTGGCCTCGCTGACGTCTACGGCGACGAGTTCGTTGCCCTTTACGAG 209610 Query 110985 AAATATGAAAAAGAAGG 111001 || || || || || || Sbjct 209609 AAGTACGAGAAGGAGGG 209593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186806854438751