Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq289 95.1 1e-14 >seq289 Length=227737 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| || ||| |||||| ||||||||| || ||||| ||||| Sbjct 105875 GCTCGACAAGGTTCTCGTTGACAATGCCGTCGGAGGCAGCGAAGAAAGCGAGGACGTGGG 105934 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | ||||| || ||||||||||| | || ||||||||| | Sbjct 105935 AGATGAAGAAACGCTCGTCATCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGA 105994 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCA 110886 |||||||| || | ||||| | || | | |||||||||||| |||||| Sbjct 105995 GATCGATCTCCTCTGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCA 106049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092224601120