Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq289 113 1e-19 >seq289 Length=227737 Score = 113 bits (124), Expect = 1e-19 Identities = 142/191 (74%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 443679 CTCGAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGA 443738 |||| || |||| ||| | ||||| | | || || |||||||| |||| || ||||| Sbjct 105625 CTCGGACAAGAAC-TCT-ACCTTCGCCAACCGCCTTGTCGCTTTCGCTGCTGTTGAAGGC 105568 Query 443739 CTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCA 443798 | || || ||||| | || || |||||||||||| |||| |||||||| ||||||| Sbjct 105567 ATCTTCTTCAGCGGTT-CGTTCGCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTTATGCC 105509 Query 443799 CGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGC 443858 |||||| || || ||||| || ||| ||| |||||||| |||| |||||| || Sbjct 105508 CGGTCTCACATTCTCCAACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGACTTTGC 105449 Query 443859 CTGTCTTCTCT 443869 || ||||||| Sbjct 105448 TTGCCTTCTCT 105438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588328042932995