Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq332 181 1e-40 >seq332 Length=679357 Score = 181 bits (200), Expect = 1e-40 Identities = 530/809 (66%), Gaps = 17/809 (2%) Strand=Plus/Plus Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811 |||||||| || || || |||||||| || || || |||||| || | |||||| || Sbjct 209419 GTGTACTCGATGATCTCAGTGCACAAATTCGAGCTGCGAATGGTACCGAGGTTCTTCTGG 209478 Query 118812 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 118871 || ||| |||| ||||||||||| |||||| | || | || ||||| || || Sbjct 209479 TTGCTCTTCCTGTTGGCAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGA 209538 Query 118872 GACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTC 118930 | || ||||| || | ||||| | || | ||| | ||||| || | || ||||| Sbjct 209539 GCCTCAAGAATGGCGTACCAGAGCTTCTG-AGCACGGACAGTCTCGCGACCACGACCCTC 209597 Query 118931 TTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 118990 | ||||||||| ||| ||||| | ||||| || || | | || | ||| || || Sbjct 209598 CTTCTCGTACTTCTCGTAAAGGGCAACGAACTCGTCGCCGTAGACGTCAGCGAGGCCAGG 209657 Query 118991 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 119050 || | || || | || | ||| | || ||| | || |||| ||||||||| Sbjct 209658 GCACTCGTTGGGACACATAAGGGTCCACTCGCCGTTCTCTTGCACACGCTGCATGAAGAG 209717 Query 119051 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 119110 || || ||||| | || |||||||||| ||| ||| | || || | || || || Sbjct 209718 ATCGGGAATCCACAAAGCATAGAAGAGATCGCGAGCACGAACCTCCTCCTTGCCGTGGTT 209777 Query 119111 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 119170 | || || | ||| | | || || ||||||||||| || ||||| | || | Sbjct 209778 CTTCCTCAGGTCGAGGAAGCCAAAGACGTCAGCGTGCCACGGCTCGAGGTAGATGGCAAA 209837 Query 119171 TGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | || | | || ||| |||||| ||||| | || ||| ||| | || Sbjct 209838 AGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACATAACGGGCGGTGTTGTTGTAGAC 209894 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTA 119282 ||| ||||| ||||| | ||| | ||| || || || || | || |||||| | Sbjct 209895 ACGGAGCATAGGAATCAAACCGTTTGATGTTCCGTTGGTTCCTCCAATGTACGAGCC--G 209952 Query 119283 TTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 119342 |||| | | ||||| || | |||||||| || || ||| ||||| |||| Sbjct 209953 GTGGCACGAATGCGGTGGACGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCAACGCG 210012 Query 119343 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402 || | | || || ||||||| || || || ||| |||| | ||||||||||| Sbjct 210013 CAGGTCTTCAGCGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCGATGAGGAAG 210072 Query 119403 CAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATG 119462 ||| ||||| || || ||||| || || |||||||| || || | |||||| || Sbjct 210073 CAGGATGACATCTGTGGGGATGGTGTGCCGGCATTGAAGAGTGTCGGCGACGCGTGTGTG 210132 Query 119463 AACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 119521 || ||| | || ||||| | |||||| ||||| | | | |||||| ||| ||| Sbjct 210133 AA-GTACTTCTGCGACATGTAGTCGTATGTCTCGATGGCCTTCTCAATGTCCTCCATGTG 210191 Query 119522 AATACCGATCGAGACCCGCATAAACATGT 119550 || || | | ||| ||||| | ||||| Sbjct 210192 GATGCCAACAGCGACACGCATGAGCATGT 210220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432177397960