Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq332 224 1e-53 seq289 105 8e-18 >seq332 Length=679357 Score = 224 bits (248), Expect = 1e-53 Identities = 1111/1747 (64%), Gaps = 29/1747 (2%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || || | || || || ||| |||||||| | Sbjct 210228 CCCGCAGCACATGCTCATGCGTGTCGCTGTTGGCATCCACATGGAGGACATTGAGAAGGC 210169 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | |||||||||||| | ||||| || | ||| |||| ||||| | || || |||| Sbjct 210168 CATCGAGACATACGACTACATGTCGCAGAAGTAC-TTCACACACGCGTCGCCGACACTCT 210110 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||| || |||||| || || ||||| |||||||| |||| || ||||||| Sbjct 210109 TCAATGCCGGCACACCATCCCCACAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 210050 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | |||||||| | || || | | || ||| ||||| ||| |||| Sbjct 210049 ACAGCATTGAGGGTATCTACGACACGCTGAAGACCTGCGCGTTGATCTCCAAGACTGCTG 209990 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGAC 104517 | |||||||| | || |||| | | |||| |||||| || | || || Sbjct 209989 GCGGTATTGGCCTCAACGTCCACCGCATTCGTGCCACCGG--CTCGTACATTGGAGGAAC 209932 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || || |||| | ||| | ||||| ||||| || || | ||| ||| || || || Sbjct 209931 CAACGGAACATCAAACGGTTTGATTCCTATGCTCCGTGTCTACAACAACACCGCCCGTTA 209872 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 ||| | || | ||| | | | | || || | || |||| || ||||| |||| Sbjct 209871 TGTCGACCAGGGTGG-CAACAAGCGCCCTGGTGCTTTTGCCATCTACCTCGAGCCGTGGC 209813 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| || || | | ||||| || || | ||||| || | ||||||| || | Sbjct 209812 ACGCTGACGTCTTTGGCTTCCTCGACCTGAGGAAGAACCACGGCAAGGAGGAGGTTCG-T 209754 Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || ||||||||||||| ||| | |||||||| |||||||||||| || | || | ||| Sbjct 209753 GCTCGCGATCTCTTCTATGCTTTGTGGATTCCCGATCTCTTCATGCAGCGTGTGCAAGAG 209694 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | ||| | ||| | || | ||||| || || ||||| ||| | || | | || Sbjct 209693 AACGGCGAGTGGACCCTTATGTGTCCCAACGAGTGCCCTGGCCTCGCTGACGTCTACGGC 209634 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || ||||| | ||||||||| ||||||||| | || ||||| | | ||| || Sbjct 209633 GACGAGTTCGTTGCCCTTTACGAGAAGTACGAGAAGGAGGGTCGTGGTCGCGAGACTGTC 209574 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | ||| | || | | ||| | || ||||| || |||| || |||||||||| || | Sbjct 209573 CGTGCT-CAGAAGCTCTGGTACGCCATTCTTGAGGCTCAGACTGAGACTGGTAACCCCTT 209515 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||| ||||| || || ||| ||||| || || ||||| | ||| || Sbjct 209514 CATGCTCTACAAGGATGCTGCCAACAGGAAGAGCAACCAGAAGAACCTCGGTACCATTCG 209455 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || || ||| | || || || ||| | || | || | |||||| ||||| || Sbjct 209454 CAGCTCGAATTTGTGCACTGAGATCATCGAGTACACCGCGCCTGATGAGGTTGCTGTCTG 209395 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATT 105110 ||||| || || | ||||| ||| | || || | | | | || | || |||| Sbjct 209394 CAACCTTGCCTCCGTTGCTCTGCCCTCCTTCGTCGA-CTACAAGCGTGGAGAGTTCGATT 209336 Query 105111 ATGAAAAACTCCACGAAGTTACG-AAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | || || ||||| || | | ||| ||| || || |||| | || || Sbjct 209335 TCAAGAAGCTTCACGAGGTCGTGCAGGTCTG-CACTCGCAATCTTAACAAGATCATCGAG 209277 Query 105170 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 || || ||||||||| || || || | | ||| | || |||||| Sbjct 209276 GTTAACCACTATCCCGTTGAGGAGGCACGCCGCAGCAACTTCCGTCACAGGCCTATTGGT 209217 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGAC 105289 || ||||| || ||||| || || | ||| | | |||| | || || || Sbjct 209216 CTTGGTGTCCAAGGTCTTGCTGACGCTTTCCTCGCTCTTCGCTTGCCTTTCGAGTCACCT 209157 Query 105290 GAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG 105349 || || ||| | |||| | || || |||||||| |||||||| ||||| | Sbjct 209156 GAGGCTAAGAAGCTCAACATCCAGATCTTCGAGACCATTTATCACGCTGCTCTGACCTCT 209097 Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409 || ||| || ||| |||||| || | || | || || || || | ||| Sbjct 209096 TCTTGCGAGACTGCCAAGGAGCTTGGTCCTTACGCTACGTACGAAGGCTCGCCTGTTTCG 209037 Query 105410 CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGG 105467 || || ||| || | || ||||||| || | || | || || || ||||||| Sbjct 209036 CAGGGCCAGCTGCAGTACGACATGTGGG-GCGTCACCCCCA-CTGATCTCTGGGACTGGG 208979 Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 | || ||||| ||| || | ||| | || ||| ||| ||||| || || | Sbjct 208978 CCTCGCTGAAGGACAAGATCGCCCAGCACGGTGTCCGCAACTCTCTGCTCATTGCGCCCA 208919 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 |||| || ||||| ||| | || || | ||||| || || ||||| || || ||||| Sbjct 208918 TGCCCACTGCCTCTACCTCCCAGATTCTTGGTAACAACGAGTGCTTCGAGCCTTACACCT 208859 Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC---AAGCATC 105644 ||||||||||| | | || || |||||||| | | |||||| | | Sbjct 208858 CGAACATCTATTCCCGTCGTGTGCTTGCTGGAGAGTTCCAGGTCGTCAACCCTTGGTTGC 208799 Query 105645 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 105704 || |||| || || || ||||||||| | || | |||||| | | ||| | Sbjct 208798 TCAAGGAT---CTTGTCGACATGGGTCTCTGGACAGAGAACATGAAGAACCGCATCATTG 208742 Query 105705 AAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACC 105764 | |||||| ||||| || || | ||||| |||| || ||| | ||| Sbjct 208741 CCGAGGGTGGATCCATCCAGCGCATCCCTAACATTCCTGATGAGATCAAGGTTCTCTACA 208682 Query 105765 GCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCT 105824 || || ||||| ||| | | |||| | |||||||| || |||||| || Sbjct 208681 AGACCGTCTGGGAGATCTCGCAGCGTACCATCATCCAGATGGCCGCTGACCGTGGTGCCT 208622 Query 105825 TCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCT 105884 ||||||| || ||| | |||| | |||| | || || ||| |||| || Sbjct 208621 TCATTGACCAGTCTCAGTCTCTGAACATTCACATGAAGGAGCCTACCATGGGCAAGATCA 208562 Query 105885 CTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGAT 105944 | || |||||| | | |||||| || ||||| || || ||||| ||||||||| Sbjct 208561 CATCCATGCACTTTGCTGGATGGAAGCTTGGCCTCAAGACTGGAATGTACTACCTCCGAA 208502 Query 105945 CTAAGGC 105951 | | ||| Sbjct 208501 CCATGGC 208495 >seq289 Length=227737 Score = 105 bits (116), Expect = 8e-18 Identities = 161/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 94792 |||||| || || | ||||| || |||||||| || ||| | | |||| | | Sbjct 105670 AGTTCCCTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGATGGATCTCGGACAAGAACTC 105611 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 | |||| || | || || |||| || || |||||| || ||||||||| |||| Sbjct 105610 -TACCTTCGCCAACCGCCTTGTCGCTTTCGCTGCTGTTGAAGGCATCTTCTTCAGCGGTT 105552 Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 | ||| ||| | || | ||||| |||||||| ||||| ||||| |||||| |||||| Sbjct 105551 CGTTC-GCGTCCATCTTCTGGCTGAAGAAGCGTGGTCTTATGCCCGGTCTCACATTCTCC 105493 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||| |||||||| |||||||| | ||| || ||||| Sbjct 105492 AACGAGCTCATCTCTCGCGACGAGGGCATGCACACCGACTTTGC 105449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257949312840