Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq308 102 2e-16 >seq308 Length=314950 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || ||||| || ||||||||||| |||| | || | Sbjct 275621 GAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGTGTACG 275680 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | ||||||||||| | ||| || || Sbjct 275681 GCCGTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTC 275740 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || || || | || | |||| || ||| || ||||| || Sbjct 275741 CTTATCCTGAATCTTCGACTTCACGTTATCGATTGTGTCCGACGACTCAACCTCAAGTGT 275800 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || | ||||| ||||||| |||||| Sbjct 275801 GATAGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 275839 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| |||| | ||| | ||||| Sbjct 276138 AGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCC 276197 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| | | ||||||||| | | || |||||||| || Sbjct 276198 TCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCC 276257 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | | || ||| ||| || ||||| || || || Sbjct 276258 TGGATCTTGCTCTTGACGTTGTCGATGGTATCCGAAGACTCCACCTCAAGGGTGATCGTC 276317 Query 152073 TTGCCCGTGA 152082 || || |||| Sbjct 276318 TTACCGGTGA 276327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815019718361