Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1878 125 7e-24 >seq1878 Length=35555 Score = 125 bits (138), Expect = 7e-24 Identities = 317/477 (66%), Gaps = 4/477 (1%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| || || | || |||||||||||||||||||| || || | | ||| ||||| | Sbjct 23113 TTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTTT 23054 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||||||||||| ||||| | || ||| ||| || | || | | || | Sbjct 23053 CCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCCTAACGAGAGGAGAA 22994 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTA-ATTCGCAGTTCATTCCTATAAGA 16852 || ||| || || ||||| || || || ||| | | | || |||||| || | ||| Sbjct 22993 GTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGC-GTTCATGCCGAGTAGA 22935 Query 16853 -CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || | || || ||||| || | |||| ||| ||||| | || |||| | |||| Sbjct 22934 GCGCAT-GGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATAAC 22876 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 | ||| | || || ||| | || || | |||| ||| | ||||| || || Sbjct 22875 ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCAAA 22816 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 || |||| || ||||| | ||||||||||||||||| || | || | ||| Sbjct 22815 GTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCCAT 22756 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 | ||||||||||| |||||||| || | || || || ||| || ||||| ||||| Sbjct 22755 CAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCCTC 22696 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 || | ||||| || | | |||| | | |||| ||||||| ||||||| Sbjct 22695 CACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTGTCTTGAATCCA 22639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517507204585800