Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1878 132 5e-26 >seq1878 Length=35555 Score = 132 bits (146), Expect = 5e-26 Identities = 297/437 (68%), Gaps = 8/437 (2%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| || |||| || ||||||||||| |||||||| || || | ||||| ||||||| Sbjct 23113 TTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTTT 23054 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 |||| |||||||| ||||| | || ||| || || | || | | | Sbjct 23053 CCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCCTAACGAGAGGAGAA 22994 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTA-AGTCGCAATTAATTCCTATAAGT 16090 || |||||| || ||||| || || || ||| | ||| || || || || | || Sbjct 22993 GTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCG-TTCATGCCGAGTAGA 22935 Query 16091 -CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 || | || || |||| |||| ||||| |||||||||| | || |||| | | || | Sbjct 22934 GCGCAT-GGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATAAC 22876 Query 16150 ATCGGTGGCTCG--TGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCG 16207 ||| || | || || ||| ||| | || || | ||| ||| | ||||| || Sbjct 22875 ATCC-TGAACAGACTGCTT-AGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCA 22818 Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267 ||||| ||||| |||||||| | ||||||||||| ||||| |||| || | | Sbjct 22817 AAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCC 22758 Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327 || ||||||||||| ||||| || || | |||||| || || || ||||| ||| Sbjct 22757 ATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCC 22698 Query 16328 TCAACAGATGCAAAAGC 16344 || || | |||||||| Sbjct 22697 TCCACTGCAGCAAAAGC 22681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511376459444200