Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq643 513 2e-140 seq1878 210 3e-49 >seq643 Length=60608 Score = 513 bits (568), Expect = 2e-140 Identities = 1360/2061 (66%), Gaps = 41/2061 (2%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 39639 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCGGTTTTTAAG 39580 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | ||||||| ||||||||||||||||| |||| | | || ||| | Sbjct 39579 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 39520 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 39519 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 39460 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 39459 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 39400 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 |||| ||||||||||||| || ||||| || || | ||| || || | |||| | Sbjct 39399 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 39340 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 ||||| | || | | || | || | ||||| || | |||||| ||||| Sbjct 39339 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 39280 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | || || | || | ||| |||||| |||||| || || | | |||||||| ||| Sbjct 39279 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 39220 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | ||||||| || ||| || ||||| || || || | ||| ||||| | ||| || Sbjct 39219 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 39160 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 53344 || | || |||| | | |||| || ||||||| ||| | || | ||| ||| Sbjct 39159 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 39100 Query 53345 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 53404 ||| || ||| | |||| || || | || || ||||||| Sbjct 39099 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 39040 Query 53405 CCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCGA 53462 ||| || | |||| ||| ||| | || || | | ||| |||||||| | Sbjct 39039 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 38982 Query 53463 AGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 53522 |||||| || || |||| || ||| || | || ||||| | || | || Sbjct 38981 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 38922 Query 53523 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 53582 || | ||||||| |||||||| || | | | || |||| || | ||| | || Sbjct 38921 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 38863 Query 53583 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATT 53641 | |||||| || | |||||| ||||||| ||| || |||||||| || || || || | Sbjct 38862 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 38803 Query 53642 ACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCA-TCTATTA-CAAA 53694 || | ||| ||||| | |||||| |||||||||| || || | ||||| || | Sbjct 38802 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 38744 Query 53695 CATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 53754 | ||| || | ||||||| ||||||||| || || |||| | | | |||| Sbjct 38743 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 38684 Query 53755 TATTATCTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACT 53811 | || || || ||||||||| |||| ||| || || | ||||| |||||| || Sbjct 38683 AACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCT 38627 Query 53812 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTC 53871 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 38626 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 38567 Query 53872 TATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT-T 53930 || || | | ||| | | ||| || |||| || || | |||| ||| | Sbjct 38566 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 38512 Query 53931 CGT--ATAGTGT--ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 53986 || ||| | | ||| || ||||| || || || | |||| | | |||||| Sbjct 38511 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 38452 Query 53987 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 54046 |||||| || ||||||| | ||| || || | | | |||| |||||||||||| Sbjct 38451 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 38392 Query 54047 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105 ||||| |||||||| || ||| |||||||| | | | | ||| || || || ||| Sbjct 38391 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 38333 Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165 || || ||||||||| | | ||||| | ||||| || ||||| ||||| | | Sbjct 38332 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 38273 Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225 |||| || || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 38272 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 38213 Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285 | ||| || | ||||||||| || ||||| || || | |||||| || | || Sbjct 38212 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 38153 Query 54286 ACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCG 54345 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 38152 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 38093 Query 54346 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405 ||| || ||||| ||||| || || |||||||| || |||| | || || ||| || Sbjct 38092 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 38033 Query 54406 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 54465 ||| | ||| | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 38032 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 37973 Query 54466 TTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCC 54525 ||| | || | |||||| || ||||| ||||| || || || || ||| |||||||| Sbjct 37972 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 37913 Query 54526 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAG 54585 || ||||||||||||| ||| || || || | || || || || | || | || Sbjct 37912 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGGCGAAG 37853 Query 54586 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 54645 | || ||| |||||| ||| || || |||||||| | ||| ||||||||| || || Sbjct 37852 AAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCATA 37793 Query 54646 AATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTAATACT 54702 || || | || || || | | | | || || |||| | | | ||| | | || Sbjct 37792 AACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGCT 37733 Query 54703 TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCAT 54762 || || ||||| |||||||||||| ||||| ||||| | | | ||| | Sbjct 37732 ---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGAC 37676 Query 54763 CACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGC 54822 |||| | ||| ||||||||||| |||||||||||| || || ||||| | || || Sbjct 37675 AACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTGC 37616 Query 54823 TAGAATGGCATAATCCGGATG 54843 ||||| || || || ||||| Sbjct 37615 AAGAATAGCGTAGTCGGGATG 37595 >seq1878 Length=35555 Score = 210 bits (232), Expect = 3e-49 Identities = 590/914 (65%), Gaps = 64/914 (7%) Strand=Plus/Minus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 23127 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 23068 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950 || || ||||||||||||||||| ||||||| | || || || | | || || | | Sbjct 23067 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACT-TTGGAATTTC 23009 Query 23951 CAATTCAGAAATCAA-TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009 | | ||| || || |||||| || || || || || ||||||| | Sbjct 23008 CTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 22949 Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 22948 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 22889 Query 24070 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 24125 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 22888 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 22833 Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 || | | ||| || || || |||||| || ||||| | ||| | |||||| ||| Sbjct 22832 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 22773 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || || || | ||| | || || || || | |||||| ||||| ||||| || ||| Sbjct 22772 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 22713 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC-CGGCGCT 24304 || || ||||| || ||||| ||||| || | ||| | || |||| | || | || Sbjct 22712 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 22653 Query 24305 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------- 24354 ||| || ||||| ||||| || | ||| || || | |||||| | Sbjct 22652 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 22593 Query 24355 ----------------------------------------TTGTCTCTATAGCATTAAAG 24374 ||||||| |||||||| || Sbjct 22592 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 22533 Query 24375 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 24434 ||||| |||||| | |||||| | || ||||| || ||||| ||| |||| Sbjct 22532 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 22473 Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494 || || || ||||| || ||||||||||| || || |||||||||| | |||||| Sbjct 22472 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 22413 Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554 ||||| | | ||| || || | | |||||||| || || ||||| ||| |||||| Sbjct 22412 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 22353 Query 24555 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCA 24611 || || | ||||| |||||| ||| ||| || | | | ||||||||||| Sbjct 22352 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 22293 Query 24612 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 24671 | |||||||||||| | ||| | || || | |||||||| |||||||| || ||||| Sbjct 22292 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 22233 Query 24672 TACATATTCCAGAT 24685 ||||||| ||| || Sbjct 22232 TACATATGCCATAT 22219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593677553278800