Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1878 143 3e-29 >seq1878 Length=35555 Score = 143 bits (158), Expect = 3e-29 Identities = 342/512 (67%), Gaps = 4/512 (1%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| |||| |||| |||||| || |||||||| || || ||| || |||||| Sbjct 23114 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 23055 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| ||||||||||||||| ||||| | | ||||| | |||| | || Sbjct 23054 TCCATGAAATCAAATGGATTT-TTGACTTTGTATACTTTGGAATTTCCTAACGAGAGGAG 22996 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 | || ||| |||| ||| || || || || ||| | | ||||| || | ||| Sbjct 22995 AAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCCGAGTAG 22936 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 || | | |||| |||||||| |||||| || || | | |||| Sbjct 22935 AGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATAAC 22876 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211 | | || | | ||||| || | || | |||| ||| | | ||| ||||| Sbjct 22875 ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCAAA 22816 Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271 || || ||||| || || | |||||||||||| ||||| |||| || | ||| Sbjct 22815 GTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCCAT 22756 Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331 ||| |||||||| || |||||||| || | ||| || || || || ||||||||||| Sbjct 22755 CAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCCTC 22696 Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATT 14390 ||||||||||| |||| | |||| |||||| | | | ||||| | || ||||| Sbjct 22695 CACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTGTCTTGA-ATCCAAC 22637 Query 14391 TTCTAGCCCATTCAGAtttttttttAATAAAA 14422 ||||| ||||| ||||| |||||| || Sbjct 22636 GGACGGCCCAGTCAGACTTTTTCTTAATACAA 22605 Score = 95.1 bits (104), Expect = 1e-14 Identities = 198/290 (68%), Gaps = 9/290 (3%) Strand=Plus/Minus Query 14474 ATGTATGTATCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 ||||| ||||| || | |||| | || |||||||||| || |||||||| || || Sbjct 22505 ATGTAAGTATCGATTAA-AAGCGAATAAGTTTCAGAGTGGATATTTTCCATCATAATTTG 22447 Query 14533 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAA 14592 ||| |||||||| ||||||| || | || || || | ||| | ||| | | Sbjct 22446 AAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACTGCTAAACCGCTCGACGAG 22387 Query 14593 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA--ATATGTTTTTAATAAAG 14650 ||||||||||| || || || || |||||||| || | | ||| | |||||| Sbjct 22386 GTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGAGAT--ATAAAG 22329 Query 14651 TATTGCTCTTCATTGCTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACT 14707 ||| | || |||| ||| | || ||||||||| | ||| ||||| | ||| | Sbjct 22328 TATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGATATCTTTAGACAAATCAATC 22269 Query 14708 TCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATAT 14757 || ||| | ||||||||| || | |||||||| ||||| |||||| Sbjct 22268 TCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATGCCATAT 22219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482309815985800