Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq414 96.9 7e-15 >seq414 Length=18224 Score = 96.9 bits (106), Expect = 7e-15 Identities = 168/240 (70%), Gaps = 16/240 (7%) Strand=Plus/Minus Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447 |||| | |||||| |||| || |||| ||||| || ||||| |||||||| ||||||| Sbjct 4147 GAGCTGTGGGAGACCTGGGGCCTATATATGGATTTCAGTGGCGACATTTTGGCGCTGAAT 4088 Query 35448 A---TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCA----ATTGGCCAAT 35500 | |||| | | | | ||||| || || || ||| ||||||| | || | Sbjct 4087 ACGTTGATGC---TACAACAGATTACACAGGGAAAGGTGTTGATCAGCTCAATGATGTAA 4031 Query 35501 ATACTAAAGACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAA 35559 ||||||| ||| ||| |||||| ||||| || | || ||| | || || ||||| Sbjct 4030 TTACTAAAT----TGA-AGACAAATCCCTATGATCGACGCATTATTCTTACTGCCTGGAA 3976 Query 35560 TCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 ||| | ||||| | || |||||| | || || |||||||| || ||||||||||| Sbjct 3975 TCCGAGTGATCTCAAGCTGATGGCTTTGCCGCCTTGCCACATTCTAGCCCAATTTTATGT 3916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989508749867925