Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08]
5,935 sequences; 52,505,057 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq643 513 2e-140
seq1878 219 5e-52
>seq643
Length=60608
Score = 513 bits (568), Expect = 2e-140
Identities = 1361/2062 (66%), Gaps = 43/2062 (2%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||| ||||| ||||| ||||| | | |||||||| |||||||| || |||||||
Sbjct 39639 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCGGTTTTTAAG 39580
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| | ||||||| |||||||||||| |||| |||| | | || ||| |
Sbjct 39579 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 39520
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|| |||||||| || || ||||| || || || || | || |||||||| | ||
Sbjct 39519 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 39460
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285
|| || |||| || ||||||| ||||| || | | ||||| || ||||||
Sbjct 39459 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 39400
Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342
|||| |||||||||| || || ||||| || || | ||| || || | |||| |
Sbjct 39399 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 39340
Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402
||||| | || | | || | || | || || || | ||| || |||||
Sbjct 39339 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 39280
Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462
| || || | || | ||| |||||| |||||| || || | |||||||| |||
Sbjct 39279 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 39220
Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522
| ||||||| || ||| || ||||| || || || | ||| ||||| | ||| ||
Sbjct 39219 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 39160
Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNN 62582
|| | || |||| | | |||| | ||||||| ||| | || | ||| |||
Sbjct 39159 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 39100
Query 62583 NNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGT 62642
||||| || ||| | |||| || || | || || || ||||
Sbjct 39099 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 39040
Query 62643 CCTTCCTTCTCAGCTAGTTTACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCAA 62700
||| || | |||| | ||||| | || || | | ||| ||||||||||
Sbjct 39039 CCTAGTTTTTTGGCTAAGT--CAACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 38982
Query 62701 AGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAA 62760
|||||| || || |||| || ||| || || || ||||| | || | ||
Sbjct 38981 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 38922
Query 62761 ACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 62820
|| | || |||| |||||||| || | | | || |||| || | ||| | ||
Sbjct 38921 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 38863
Query 62821 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATT 62879
| |||||| || | |||||| ||||||| ||| || |||||||| ||||| || || |
Sbjct 38862 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 38803
Query 62880 ACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC-----TATTA-CAAA 62932
|| | ||| ||||| | |||||| |||||||||| ||| ||||| || |
Sbjct 38802 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 38744
Query 62933 CATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTG 62992
| ||| || | ||||||| |||||| || || || |||| | | | ||||
Sbjct 38743 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 38684
Query 62993 TATTATCTCAGTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACT 63049
| || || || ||||||||| |||| |||||| || | ||||| |||||| ||
Sbjct 38683 AACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCT 38627
Query 63050 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 63109
|||||| ||||| ||||| || || || || || || ||||||||||| | || | |||
Sbjct 38626 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 38567
Query 63110 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT-T 63168
|| || | | ||| | | | ||| || |||| || || |||||| ||| |
Sbjct 38566 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 38512
Query 63169 CGTATAGAGT----ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGA 63224
|| | | | ||| || || || || || || | |||| | | | ||||
Sbjct 38511 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 38452
Query 63225 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63284
|||||| || ||||||| | ||| || || | | | |||| ||||||||||||
Sbjct 38451 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 38392
Query 63285 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343
||||| |||||||| || ||| |||||||| | || | | ||| || || || |||
Sbjct 38391 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 38333
Query 63344 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63403
|| || ||||||||| | | ||||| | ||||| || ||||| ||||| || |
Sbjct 38332 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 38273
Query 63404 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63463
|||| || || || || || || ||||| | ||||| || || ||||| | ||||
Sbjct 38272 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 38213
Query 63464 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGC 63523
| ||| || | |||||| ||||| | ||||| || || | |||||| | || | ||
Sbjct 38212 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 38153
Query 63524 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63583
||||| | ||| || || || || || || ||||||| || | |||||
Sbjct 38152 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 38093
Query 63584 TTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643
||| || || || ||||| || || || ||||| || |||| | || || ||| ||
Sbjct 38092 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 38033
Query 63644 AGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63703
||| | ||| | | ||| || || ||||| ||||| ||||| |||||||| |
Sbjct 38032 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 37973
Query 63704 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63763
||| | || | |||||| || ||||| ||||| || || || || ||| ||||||||
Sbjct 37972 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 37913
Query 63764 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAA 63823
|| ||||||||||||| ||| || || || | || |||||||| | || | ||
Sbjct 37912 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCGAA 37854
Query 63824 CAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63882
||| || ||| |||||| ||| || || |||||||| | ||| ||||||||| || |
Sbjct 37853 GAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCAT 37794
Query 63883 AAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATC---CATGGTAATAC 63939
||| || | ||||| |||| | | | || || |||| | || ||| | | |
Sbjct 37793 AAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGC 37734
Query 63940 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 63999
| || || ||||| |||||||||||| ||||| ||||| | | | | ||| |
Sbjct 37733 T---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGA 37677
Query 64000 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGG 64059
|||| | ||| ||||||||||| ||||||||||| || | ||||| | || |
Sbjct 37676 CAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTG 37617
Query 64060 CTAGAATGGCATAATCCGGATG 64081
| ||||| || || || |||||
Sbjct 37616 CAAGAATAGCGTAGTCGGGATG 37595
>seq1878
Length=35555
Score = 219 bits (242), Expect = 5e-52
Identities = 593/913 (65%), Gaps = 62/913 (7%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || |
Sbjct 23127 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 23068
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
||| || |||||||||||||||||||| ||||| | || ||||| | ||| | |||
Sbjct 23067 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 23008
Query 33398 CAATTCAGAAATCAA-TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
|| ||| || || |||||| |||||||| || || ||||||| |
Sbjct 23007 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 22949
Query 33457 TCATTCCTATGAGTTTAAC---TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATA 33513
|||| || |||| | | ||| || || |||| |||||||||||||| || |
Sbjct 22948 TCATGCC---GAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGA 22892
Query 33514 CCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAA 33573
| || | ||| |||| | ||| | | | | ||| || |||||| ||
Sbjct 22891 CGGCTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAA 22832
Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633
| | | ||| || || || ||| || || ||||| | ||| | |||||||||||
Sbjct 22831 AGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAA 22772
Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693
| || || || | ||| | || || || || | |||||| |||||||| || || ||
Sbjct 22771 AGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCAC 22712
Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCT- 33751
|| || ||||| || ||||||||||| || | ||| | | |||| | || | ||
Sbjct 22711 TGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTT 22652
Query 33752 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------TC 33803
||| || ||||| ||||| || | ||| || || | |||||| | ||
Sbjct 22651 TGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATC 22592
Query 33804 GTT-----------------------------------------TCTATGGCATTAAAGA 33822
||| || || ||||| || |
Sbjct 22591 GTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAA 22532
Query 33823 GATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCG 33882
|||| |||||| | |||||| | ||||||||||| ||||| ||| |||| |
Sbjct 22531 GATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAG 22472
Query 33883 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 33942
| || || ||||| || || |||||||| || || |||||||||| | ||||||||
Sbjct 22471 AGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCA 22412
Query 33943 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAA 34002
|||| | | ||| || || | | |||||||| || || || || ||| |||||||
Sbjct 22411 CTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAA 22352
Query 34003 ACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCAT 34059
| || | ||||| |||||| ||| ||| || | | | ||||||||||| |
Sbjct 22351 AGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGT 22292
Query 34060 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 34119
|||||||||||| | ||| | || || | |||||||| |||||||| || ||||| |
Sbjct 22291 GGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGT 22232
Query 34120 ACATATTCCAGAT 34132
|||||| ||| ||
Sbjct 22231 ACATATGCCATAT 22219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629770875406800
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