Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq643 511 6e-140 seq1878 210 3e-49 >seq643 Length=60608 Score = 511 bits (566), Expect = 6e-140 Identities = 1361/2062 (66%), Gaps = 43/2062 (2%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 39639 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCGGTTTTTAAG 39580 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | ||||||| |||||||||||| |||| |||| | | || ||| | Sbjct 39579 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 39520 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 39519 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 39460 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 39459 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 39400 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 |||| |||||||||| || || ||||| | || || | ||| || || | |||| | Sbjct 39399 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 39340 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 ||||| | || | | || | || | ||||| || | |||||| ||||| Sbjct 39339 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 39280 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 | || || | || | ||| |||||| |||||| || || | | |||||||| ||| Sbjct 39279 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 39220 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315 | ||||||| || ||| || ||||| || || || | ||| ||||| | ||| || Sbjct 39219 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 39160 Query 65316 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 65375 || | || |||| | | |||| || ||||||| ||| | || | ||| ||| Sbjct 39159 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 39100 Query 65376 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 65435 ||| || ||| | |||| || || | || || ||||||| Sbjct 39099 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 39040 Query 65436 CCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCGA 65493 ||| || | |||| ||| ||| | || || | | ||| |||||||| | Sbjct 39039 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 38982 Query 65494 AGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 65553 |||||| || || |||| || ||| || | || ||||| | || | || Sbjct 38981 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 38922 Query 65554 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 65613 || | ||||||| |||||||| || | | | || |||| || | ||| | || Sbjct 38921 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 38863 Query 65614 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATT 65672 | |||||| || | |||||| ||||||| ||| || |||||||| ||||| || || | Sbjct 38862 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 38803 Query 65673 ACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAATCGCTCATC-----TATTA-CAAA 65725 || | ||| ||||| | |||||| |||||||||| | ||| ||||| || | Sbjct 38802 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 38744 Query 65726 CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 65785 | ||| || | ||||||| ||||||||| || || |||| | | | |||| Sbjct 38743 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 38684 Query 65786 TATTATCTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACT 65842 | || || || ||||||||| |||| ||| || || | ||||| |||||| || Sbjct 38683 AACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCT 38627 Query 65843 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 65902 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 38626 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 38567 Query 65903 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT-T 65961 || || | | ||| | | | ||| || |||| || || | |||| ||| | Sbjct 38566 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 38512 Query 65962 CGT--ATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 66017 || ||| | | ||| || || || || || || | |||| | | |||||| Sbjct 38511 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 38452 Query 66018 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 66077 |||||| || ||||||| | ||| || || | | | |||| |||||||||||| Sbjct 38451 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 38392 Query 66078 TCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 66136 ||||| |||||||| || ||| |||| ||| | | | | ||| || || || ||| Sbjct 38391 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 38333 Query 66137 CTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCAT 66196 || || ||||||||| | | ||||| ||||| || ||||| ||||| || | Sbjct 38332 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 38273 Query 66197 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 66256 |||| || || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 38272 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 38213 Query 66257 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGC 66316 | ||| || | ||||||||| || | ||||| || || | |||||| || | || Sbjct 38212 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 38153 Query 66317 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 66376 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 38152 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 38093 Query 66377 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 66436 ||| || ||||| ||||| || || |||||||| || |||| | || || ||| || Sbjct 38092 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 38033 Query 66437 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 66496 ||| | ||| | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 38032 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 37973 Query 66497 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 66556 ||| | || | |||||| || ||||| ||||| || || || || ||| |||||||| Sbjct 37972 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 37913 Query 66557 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 66616 || ||||||||||||| ||| || || || | || || || || | || | || Sbjct 37912 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCGAA 37854 Query 66617 CAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 66675 ||| || ||| |||||| ||| || || |||||||| | ||| ||||||||| || | Sbjct 37853 GAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCAT 37794 Query 66676 AAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTAATAC 66732 ||| || | || || || | | | | || || |||| | | | ||| | | | Sbjct 37793 AAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGC 37734 Query 66733 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCA 66792 | || || ||||| |||||||||||| ||||| ||||| | | | | ||| | Sbjct 37733 T---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGA 37677 Query 66793 TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGG 66852 |||| | ||| ||||||||||| |||||||||||| || || ||||| | || | Sbjct 37676 CAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTG 37617 Query 66853 CTATAATGGCATAATCCGGATG 66874 | | ||| || || || ||||| Sbjct 37616 CAAGAATAGCGTAGTCGGGATG 37595 >seq1878 Length=35555 Score = 210 bits (232), Expect = 3e-49 Identities = 591/914 (65%), Gaps = 64/914 (7%) Strand=Plus/Minus Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 23127 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 23068 Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCC 35973 || || ||||||||||||||||| |||||||| | || || || | ||| | ||| Sbjct 23067 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 23008 Query 35974 CAATTCAGAAATCAA-TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 36032 || ||| || || |||||| || ||||| || || ||||||| | Sbjct 23007 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 22949 Query 36033 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 36092 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 22948 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 22889 Query 36093 CGTCTGTTATAATA----GATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 36148 | | ||| |||| | || |||| || || ||| | |||||| | Sbjct 22888 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 22833 Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 || | | ||| || || || |||||| || ||||| | ||| | |||||| ||| Sbjct 22832 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 22773 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || || | ||| | || || || || | |||||| ||||| ||||| || ||| Sbjct 22772 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 22713 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACT 36327 || || ||||| || ||||| ||||| || | ||| | | |||| | || | || Sbjct 22712 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 22653 Query 36328 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------- 36377 ||| || ||||| ||||| || | ||| || || | |||||| | Sbjct 22652 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 22593 Query 36378 ----------------------------------------TTGTCTCTATAGCATTAAAG 36397 ||||||| |||||||| || Sbjct 22592 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 22533 Query 36398 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 36457 ||||| |||||| | |||||| | || ||||| || ||||| ||| |||| Sbjct 22532 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 22473 Query 36458 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 36517 || || || ||||| || ||||||||||| || || |||||||||| | |||||| Sbjct 22472 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 22413 Query 36518 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 36577 ||||| | | ||| || || | | |||||||| || || ||||| ||| |||||| Sbjct 22412 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 22353 Query 36578 AACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTA-GTTTATTCCAATCA 36634 || || | ||||| |||||| ||| ||| | | || | | ||||||||||| Sbjct 22352 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 22293 Query 36635 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 36694 | |||||||||||| | ||| | || || | |||||||| |||||||| || ||||| Sbjct 22292 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 22233 Query 36695 TACATATTCCAGAT 36708 ||||||| ||| || Sbjct 22232 TACATATGCCATAT 22219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658123971805400