Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq643 565 4e-156 seq1878 214 3e-50 >seq643 Length=60608 Score = 565 bits (626), Expect = 4e-156 Identities = 1374/2062 (67%), Gaps = 43/2062 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 39639 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCGGTTTTTAAG 39580 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | ||||||| ||||||||||| |||| |||| | | || ||| | Sbjct 39579 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 39520 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 39519 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 39460 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 39459 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 39400 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 |||| |||||||||| || || ||||| | || || | ||| || || | ||| | Sbjct 39399 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 39340 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 ||||| | || | | || | || | ||||| || | |||||| ||||| Sbjct 39339 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 39280 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | || || | || | ||| |||||| ||||||||| || | | |||||| ||| Sbjct 39279 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 39220 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | ||||||| || ||| |||||||| || || || | ||| ||||| | ||| || Sbjct 39219 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 39160 Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254 || || |||| | | |||| ||| ||||||||||| | || | || ||| | Sbjct 39159 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 39100 Query 79255 CAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGT 79314 || | ||| ||||| || ||| | ||| || || ||| || || || | Sbjct 39099 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 39040 Query 79315 CCTTCCTTTTCGGCTAATTCACAACTC--GCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 ||| |||| |||||| ||| ||| | || ||| | | ||| |||||||| | Sbjct 39039 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 38982 Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAA 79432 | |||| || ||||||| || ||| ||| | || ||||| | || | || Sbjct 38981 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 38922 Query 79433 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTT 79492 || | ||||||| |||||||| || | | | || |||| || | ||| | || Sbjct 38921 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 38863 Query 79493 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551 | |||||| || | |||||| ||||||| ||| || |||||||| |||||||| |||| Sbjct 38862 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 38803 Query 79552 ACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TATTA-CAAA 79604 || | ||| ||||| | |||||| |||||||||| ||| ||||| || | Sbjct 38802 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 38744 Query 79605 CATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 79664 | ||| || | ||||||| ||||||||| || || |||| | | | |||| Sbjct 38743 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 38684 Query 79665 TATTATTTCAGTGCAGAGGTTA---CTACACTTAATGGTTCCTAAATTTTGTTGATTACT 79721 | ||||| || || || ||| |||| || || || | ||||| |||||| || Sbjct 38683 AACAATTTCGGTACAAAGATTAGAGCTACGGATA---GTCCCGAGATTTTTTTGATTGCT 38627 Query 79722 CTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTC 79781 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 38626 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 38567 Query 79782 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT-- 79839 || || | | ||| | | | ||| || |||| || || | |||| ||| Sbjct 38566 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 38512 Query 79840 ---TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA 79896 || || | | |||||| || || || || || | ||||| ||| |||||| Sbjct 38511 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 38452 Query 79897 CATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGA 79956 ||||| ||| ||||||| | ||| || |||| | | |||| |||||||||||| Sbjct 38451 CATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 38392 Query 79957 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATT 80015 ||||| |||||||| || ||| |||||||| | | | | || || || || ||| Sbjct 38391 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 38333 Query 80016 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 80075 || || ||||||||| | | ||||| | ||||| || ||||| ||||| || | Sbjct 38332 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 38273 Query 80076 AACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 80135 ||||||| || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 38272 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 38213 Query 80136 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGC 80195 | ||| || | ||||||||| || | ||||| || || | |||||| || | || Sbjct 38212 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 38153 Query 80196 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 80255 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 38152 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 38093 Query 80256 TTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315 ||| || ||||| ||||| || || || ||||| || |||| | || || ||| || Sbjct 38092 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 38033 Query 80316 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 80375 ||| | ||| | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 38032 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 37973 Query 80376 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCC 80435 ||| | |||| |||||| || ||||| ||||| ||||| || || ||| |||||||| Sbjct 37972 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 37913 Query 80436 TACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 80495 || ||||||||||||| ||| || || || | || || || || | ||| | || Sbjct 37912 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCGAA 37854 Query 80496 CAAG-TAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 80554 ||| || ||| |||||| ||| || || |||||||| | ||| ||||||||| || | Sbjct 37853 GAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCAT 37794 Query 80555 AAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTGATAC 80611 ||| || | || || || | | | | || || |||| | | | ||| | | | Sbjct 37793 AAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGC 37734 Query 80612 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 80671 | || || ||||| |||||||||||| ||||| ||||| | | | | ||| | Sbjct 37733 T---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGA 37677 Query 80672 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGG 80731 |||| | ||| ||||||||||| ||||||||||| || || ||||| | || | Sbjct 37676 CAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTG 37617 Query 80732 CTAAAATGGCATAATCTGGATG 80753 | | ||| || || || ||||| Sbjct 37616 CAAGAATAGCGTAGTCGGGATG 37595 >seq1878 Length=35555 Score = 214 bits (236), Expect = 3e-50 Identities = 589/910 (65%), Gaps = 56/910 (6%) Strand=Plus/Minus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 23127 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 23068 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 ||| || |||||||||||||||||||| ||||| | || || || | ||| | ||| Sbjct 23067 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 23008 Query 49776 CAATTCAGAAATCAA-TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834 || ||| || || ||| || || ||||| || || ||||||| | Sbjct 23007 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 22949 Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894 |||| || | || ||| || || |||| |||||||||||||| || || | Sbjct 22948 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 22889 Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954 | | ||| |||| | ||| | | | | ||| ||| |||||| ||| | Sbjct 22888 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGA 22829 Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014 | ||| || || || ||| || || ||||| | ||| |||||||| ||||| | Sbjct 22828 GGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGG 22769 Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074 | || || | ||| | || || || || | |||||| ||||| ||||| || ||| | Sbjct 22768 TTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGA 22709 Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGT 50131 | || ||||| || ||||| ||||| || ||||| | | |||| | | | | ||| Sbjct 22708 AAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTGT 22649 Query 50132 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------TCGTT 50184 | || ||||| ||||| || | ||| || || | |||||| | ||||| Sbjct 22648 CTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTT 22589 Query 50185 -----------------------------------------TCTATGGCATTAAAGAGAT 50203 || || ||||| || |||| Sbjct 22588 AACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGAT 22529 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | |||||| | |||||| | ||||||||||| ||||| ||| |||| || | Sbjct 22528 AAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAGAGT 22469 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || ||||| || || |||||||| || || |||||||||| | ||||||||||| Sbjct 22468 GGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTT 22409 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 | | | ||| || || | | |||||||| || || ||||| ||| |||||||| | Sbjct 22408 CACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGG 22349 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAATCATTGA 50440 | | ||||| |||||| | | ||| | | || | | ||||||||||| | || Sbjct 22348 CTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGA 22289 Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500 |||||||||| | ||| | || || | |||||||| |||||||| || ||||| |||| Sbjct 22288 TATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACA 22229 Query 50501 TATTCCAGAT 50510 ||| ||| || Sbjct 22228 TATGCCATAT 22219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718215513433400