Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq643 569 3e-157 seq1878 183 4e-41 >seq643 Length=60608 Score = 569 bits (630), Expect = 3e-157 Identities = 1381/2075 (67%), Gaps = 43/2075 (2%) Strand=Plus/Minus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||| | ||| | || |||||||| |||| ||||| || | |||||||| |||||||| Sbjct 39652 TTCTTGGTCAACGGTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACAT 39593 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGC 70906 ||| ||||||| || | ||||||| |||||||||||| |||| |||| |||| Sbjct 39592 GCCGGTTTTTAAGCCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGT 39533 Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966 | || || | |||||||||||| ||||| ||||| || || || || | || | Sbjct 39532 TGGG-TCTTTCAAGTGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAG 39474 Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026 ||||||| | || || || |||| || ||||||| ||||| || | | |||| Sbjct 39473 CAGCCATCTGAATTATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAA 39414 Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTT 71083 | || |||||| |||| |||||||||| || || ||||| | || || | ||||| Sbjct 39413 TTTCGGCTGGAATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTT 39354 Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143 | || | ||| |||||| | || | | || | || | ||||| || | Sbjct 39353 TCATGTTATCAGACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAA 39294 Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203 |||||| ||||| | || || | || | ||| |||||| |||||| || || | Sbjct 39293 TTTGAAACTCTCCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAAC 39234 Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGAC 71263 |||||||| ||| | ||||||| || ||| || ||||| || || || | || | Sbjct 39233 ACTCATTAAATCCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGC 39174 Query 71264 TATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 |||| | ||| |||| | |||| | | |||| ||| ||||||| ||| | || | Sbjct 39173 TATTCCGAAGGCCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTG 39114 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 ||| ||| || | ||| || || | | Sbjct 39113 TAGGTGTAACGCCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGT 39054 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTC--GCCTCTAATGCTCCATA 71441 | || ||||||| ||| ||||| ||||| ||| ||| | || ||| ||| Sbjct 39053 AAGTCTCGTATGTACCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATG 38996 Query 71442 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501 ||| |||||||| || |||| || ||||||| || ||| || || || ||||| | Sbjct 38995 ATATATGGTTTCAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAA 38936 Query 71502 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561 || | |||| | ||||||| |||||||| || | | | || |||| ||| | Sbjct 38935 GCGCAAAGCCAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCG 38876 Query 71562 CTTATTAGAAATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 71620 ||| | || | |||||| || | |||||| ||||||| ||| || |||||||| | Sbjct 38875 TAAATT-GCTCTTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCA 38817 Query 71621 GATTTCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC- 71678 |||| || |||| || | ||| ||||| | |||||| |||||||||| | ||| Sbjct 38816 GATTCCTAACTACAACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCA 38758 Query 71679 ----TATTACAAACACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732 ||||| | | | || ||| || | ||||||| ||||||||| || || |||| Sbjct 38757 GCTGTATTA-ACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATC 38699 Query 71733 AGCATCGGCATATTGTATAATTTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAA 71789 | | | |||| | |||||| || ||||||||| |||| ||| || || | Sbjct 38698 CGGAGATGAGTATTCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAG 38642 Query 71790 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGT 71849 ||||| |||||| |||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 38641 ATTTTTTTGATTGCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGT 38582 Query 71850 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-TTCTT-- 71906 ||| | || | ||| || || | | ||| | | | ||| || ||| |||| Sbjct 38581 TTCTGTTTGTGCTTCGATTATTGAGTACCATAGCTTTTGTGCC---ATAATAGTTCTACG 38525 Query 71907 GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966 | | || |||| ||| || | | |||||| || || || || || | ||| Sbjct 38524 GCCTTTCCCTTCTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATC 38465 Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026 ||| |||||||||||| || ||||||| | ||| || |||| | | |||| Sbjct 38464 AGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCT 38405 Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCT 72085 ||||||||||||||||| |||||||| || ||| |||||||| | | | | || | Sbjct 38404 CTTCATAAAGAGATCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTT 38346 Query 72086 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 72145 | || || ||| || || ||||||||| | | ||||| | ||||| || |||| Sbjct 38345 CTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCA 38286 Query 72146 AGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 72205 | ||||| || | ||||||| || || || || || ||||| | ||||| || || | Sbjct 38285 AATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTAT 38226 Query 72206 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 72265 |||| | |||| | ||| || | ||||||||| || ||||| || || | ||||| Sbjct 38225 TATTGAAGACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATAT 38166 Query 72266 AGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325 | || | || ||||| ||| || || || || || || ||||||| | Sbjct 38165 AAGCACCTGTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAA 38106 Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 72385 | | ||||| ||| || ||||| ||||| || || |||||||| || |||| | || Sbjct 38105 TCATAGCGCAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAA 38046 Query 72386 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445 || ||| || ||| | ||| | ||| || || ||||| ||||| |||| Sbjct 38045 TTAAAAAGCATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAG 37986 Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 72505 | |||||||| |||| | |||| |||||| || ||||| ||||| ||||| || || Sbjct 37985 CATGCGTAAAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCAT 37926 Query 72506 ATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT 72565 ||| || ||||| || ||||||||||||| |||||| || || | || || || || | Sbjct 37925 CTTGGTGAATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTAT 37866 Query 72566 TATTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624 ||| | || ||| || ||| |||||| ||| || || |||||||| | ||| | Sbjct 37865 CATTGA-GGCGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTA 37807 Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATC- 72683 |||||||| || |||| || | ||||| || | | | | || || |||| | || Sbjct 37806 AAGTCTCGATCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCG 37747 Query 72684 --CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 72741 ||| | | || || || ||||| |||||||||||| ||||| ||||| | | Sbjct 37746 TACATAGATTTGCT---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGG 37690 Query 72742 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 72801 | | ||| | |||| | ||| ||||||||||| ||||||||||| || || Sbjct 37689 TAGAGATCAGAGACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACA 37630 Query 72802 GCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||||| | || || ||||| || || || ||||| Sbjct 37629 GCTATGCGTGCTGCAAGAATAGCGTAGTCGGGATG 37595 >seq1878 Length=35555 Score = 183 bits (202), Expect = 4e-41 Identities = 586/914 (64%), Gaps = 64/914 (7%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||||| ||||| || ||||| || |||||||||||||| |||||||| || | Sbjct 23127 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 23068 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 ||| || |||||||||||||||||||| ||||| | || || || | ||| | ||| Sbjct 23067 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 23008 Query 41881 CAATTCAGAAATCAA-TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 || ||| || || |||||| | |||||| || || ||||||| | Sbjct 23007 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 22949 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 22948 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 22889 Query 42000 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 42055 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 22888 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 22833 Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 || | | ||| || || || ||| || || || || | ||| | |||||| ||| Sbjct 22832 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 22773 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || || | ||| | || || || || | |||||| || || ||||| || ||| Sbjct 22772 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 22713 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACT 42234 || || ||||| || ||||| ||||| || | ||| | | |||| | || | || Sbjct 22712 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 22653 Query 42235 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------T 42285 ||| || ||||| ||||| || | ||| || || | |||||| | | Sbjct 22652 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 22593 Query 42286 CGTT-----------------------------------------TCTATGGCATTAAAG 42304 |||| || || ||||| || Sbjct 22592 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 22533 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 ||||| |||||| | |||||| | || |||||||| ||||| ||| |||| Sbjct 22532 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 22473 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || || ||||| || || |||||||| || || |||| ||||| | || ||| Sbjct 22472 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 22413 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 ||||| | | ||| || || | | ||||| || || || ||||| ||| |||||| Sbjct 22412 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 22353 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAAT-TTATTCCAATCA 42541 || || | ||||| |||||| ||| ||| || | || | ||||||||||| Sbjct 22352 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 22293 Query 42542 TTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTA 42601 | |||||||||||| | ||| | || || | |||||||| ||||| || || ||||| Sbjct 22292 TGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 22233 Query 42602 TACATATTCCAGAT 42615 ||||||| ||| || Sbjct 22232 TACATATGCCATAT 22219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671089409860600