Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1878 91.5 2e-13 >seq1878 Length=35555 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/261 (69%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | ||||||||||| || |||| || |||||||| | || ||| | ||| || Sbjct 22219 ATATGGCATATGTACAAAAAAGCCGAGGCATCTTTTTGGACTGCTGAGGAGATTGATTTG 22278 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || || | |||||||| | | ||| | | ||| ||| ||| | |||||||| Sbjct 22279 TCTAAAGATATCCACGATTGGAATAACCGTCTCAATGATGATGAACGATACTTTATATCT 22338 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || | | ||||| ||||||| ||| || || || || || || || || || || || Sbjct 22339 CATGTGCTAGCCTTTTTTGCCGCCTCAGACGGGATTGTTAATGAAAACCTCGTCGA-GCG 22397 Query 125198 ATTCTCTCA-AGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 || | || || || ||||| |||| | |||||| ||||| ||||| |||| Sbjct 22398 GTT-TAGCAGTGAAGTGCAGATTCCTGAGGCTAGATTCTTTTATGGATTTCAAATTATGA 22456 Query 125257 TTGAGAACGTGCACTCGGAAA 125277 | || || | ||||| |||| Sbjct 22457 TGGAAAATATCCACTCTGAAA 22477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741004222670600