Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1477 109 4e-19 >seq1477 Length=21063 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||| | | | ||| ||||| || ||| ||||| || || || || || | Sbjct 16778 CCTCCTCTTAGACGAAGCACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 16719 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 || || |||| || | |||||||||||||||||| || || || |||||| |||| Sbjct 16718 AAAGTTCGGCCATCCTCAAGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGGA 16659 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | |||||||||||| |||||| |||||| || ||| || || | | ||| || Sbjct 16658 ATTCCTTCTTTATCTTGAATTTTGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGACT 16599 Query 44075 TCGACCGTAATTGTTTTACCGGT 44097 |||| ||||| ||||||||||| Sbjct 16598 TCGAGAGTAATAGTTTTACCGGT 16576 Score = 98.7 bits (108), Expect = 7e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 || ||||| || || |||||||| | ||| |||| || | ||| ||||| ||||| Sbjct 16970 TCCTTTTGTATGTTGTAATCGTTAAGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAG 16911 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 ||||| | ||| |||||| | || | ||||||||||||| || || |||||| | Sbjct 16910 ATCAATCTTTGTTGGTCCGGTGGAATACCTTCTTTATCTTGGATCTTACTTTTGACGTTG 16851 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 | | ||||||| | || || || | || |||||||| || || || || || ||| Sbjct 16850 TCTATTGTATCTGAAGATTCTACTTCAAGAGTTATTGTTTTCCCAGTCAATGTTTTGACA 16791 Query 44111 AATATTTGCATG 44122 ||||| |||||| Sbjct 16790 AATATCTGCATG 16779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354751937938380