Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1477 105 6e-18 seq1135 82.4 7e-11 >seq1477 Length=21063 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||||||| | ||||| | || | || || ||||||||||| | || ||| Sbjct 16015 ACTGGAAAAACCATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGT 16074 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 || || ||||||||||| || || ||||||||||||||||| |||| | || ||| Sbjct 16075 AAAATACAAGACAAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTTGCTGGAAAA 16134 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| || || | | ||| | ||||||||||| ||||||||||| || |||| Sbjct 16135 CAACTTGAGGACGGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCAC 16194 Query 26973 CTGGTCCT 26980 ||||||| Sbjct 16195 TTGGTCCT 16202 Score = 104 bits (114), Expect = 2e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| ||| | || ||| | || |||| ||| ||||||||| || | || ||| Sbjct 16291 ACTGGTAAAACCATTACCCTTGAGGTAGAGTCATCCGACACCATTGATAATGTGAAAAGT 16350 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 || || ||||| ||||| || || ||||||||||||||| | || | | |||||| Sbjct 16351 AAAATACAGGACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAA 16410 Query 26913 CAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCA 26971 ||||| || |||| | | ||| | | | || || |||||||||||||||||||| | || Sbjct 16411 CAACTTGAGGATGGTCG-AACATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCA 16469 Query 26972 TCTGGTCCT 26980 ||| || || Sbjct 16470 TCTAGTTCT 16478 >seq1135 Length=44572 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| | || || ||| | || || | || | || ||| Sbjct 30677 ATGCAAATTTTCGTGAAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCG 30736 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| ||| || || || ||||| || || || || ||| Sbjct 30737 GACACCATCGACAATGTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAA 30796 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | || ||||||||||| || | | | | ||||| ||| Sbjct 30797 CAACGTTTGATTTTTGCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAAC 30856 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 || ||||||||||||||| | ||||| || || | ||| | |||||| Sbjct 30857 ATCCAAAAAGAATCTACTCTTCATCTCGTACTTCGTCTTCGTGGAGGA 30904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478626889233200