Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq643 259 1e-63 seq289 89.7 1e-12 >seq643 Length=60608 Score = 259 bits (286), Expect = 1e-63 Identities = 1102/1706 (65%), Gaps = 65/1706 (4%) Strand=Plus/Plus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| || | ||||| |||| | ||| || || ||| |||||| | | ||||| Sbjct 37817 TATTTT-GGCTTCAAGACTCTGGAAAGATCATATCTTCTTCGCCTCAATGATAAAATTGT 37875 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG---T 363503 || || || || |||||| |||||||||| ||| |||| || || || |||| | Sbjct 37876 GGAGCGGCCACAACATATGATAATGCGTGTCGCTGTTGGAATTCA---CCAAGATGACAT 37932 Query 363504 TGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-----TTCACGCACGCC 363558 ||| | || || || || ||||| ||||| || || || || ||||| || Sbjct 37933 TGAATCTGCTATAGAGACTTATAA---TCTAA-TG-TCCAATAAATACTTTACGCATGCT 37987 Query 363559 ACGCCAACA--ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC 363616 | || || || | || || || |||| | | || | ||||| |||||| | Sbjct 37988 TCCCCTACTCTATTTGCA--GCCGGTACTCCACAATCTCAACTCTCTTCATGCTTTTTAA 38045 Query 363617 TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTA 363676 | | ||||| || ||| || || || |||| || || | || | ||| ||| | | Sbjct 38046 TTGATATGAAAGAGGATAGTATTGATGGAATCTACGATACTTTGAAAACTTGCGCTATGA 38105 Query 363677 TTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGT 363735 |||| || ||||| || || ||||| || || || |||| || |||| | Sbjct 38106 TTTCTAAAAATGCCGGTGGTATTGGCTTAAATATTCATCGGATTCGCGCGACAGGTGC-T 38164 Query 363736 TACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 || || ||| || ||| ||| |||| ||||| | || || ||||| || || || | Sbjct 38165 TATAT-CGCAGGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAA 38223 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 |||||||| || || || || || ||||| ||||| || || || ||||| || Sbjct 38224 TAATACTGCCAGATATGTTGATCAAGGTGGTAATAAGCGTCCGGGAGCATTCGCTATATA 38283 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAA 363913 | | ||||| || |||||||| |||||||| || || ||||| ||||| ||||| || Sbjct 38284 TTTGGAGCCATGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAA 38343 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 | || ||| | |||||||||||||| |||||||| |||||| | |||| | ||||||| Sbjct 38344 A-GAAGAAGTTCGTGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGA 38402 Query 363974 AGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030 || | || || | ||| ||| ||| | || | ||||| |||||||| |||| Sbjct 38403 AGAGAGTTGAAAAAAATGGT--GAA-TGGACCCTGATGTGCCCTTGTGAATGTCCTGGTC 38459 Query 364031 TTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA-TCGGAGGGA 364089 | | ||||| | || || || | || ||| |||| |||||||||||| | ||||| Sbjct 38460 TAGCTGATGTGTATGGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGA 38519 Query 364090 AAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATT 364149 ||||| |||| || ||| ||||| |||||||||| | || || || | || | Sbjct 38520 AAGGC-CGTAGAACTATTATGGCACAAAAGCTATGGTACTCAATAATCGAAGCACAAACA 38578 Query 364150 GAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAG 364209 || || || || || | |||| | ||||||||| | || || ||| ||| || | Sbjct 38579 GAAACTGGTACCCCTTTTATGCTCTACAAAGATGCATGTAATAAAAAGAGCAATCAAAAA 38638 Query 364210 CACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCC 364268 | || || || | || | || | || || |||||||| ||| |||||||| | |||| Sbjct 38639 AATCTCGGGACTA-TCCGTAGCTCTAATCTTTGTACCGAAATTGTTGAATACTCATCTCC 38697 Query 364269 CGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA------ 364322 || || || || ||||| | || || | || | ||| | | ||| || Sbjct 38698 GGATGAAGTGGCTGTTTGTAATTTGGCATCCCTAGCTTTGCCGACCTATGTTAATACAGC 38757 Query 364323 AGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCA--TGCTACTT-GCAA 364379 ||| ||||||||| || | ||| |||| || || ||| | || || | || Sbjct 38758 TGATAATACTTTTGATTTTCACAAACTTCATGATGT---CTGTCAGGTTGTAGTTAGGAA 38814 Query 364380 TCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATA 364438 ||| | || | || || ||||| ||||| | |||||||| || | | ||| Sbjct 38815 TCTGAATAAAATCATTGATGTTAATTACTATCCTGTGCCTGAAGCTCGTAAGAGC-AATT 38873 Query 364439 TGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATG---ATGC 364495 | || || || || || | | | || || || || || || || || ||| || ||| Sbjct 38874 TACGCCACCGACCAATAGCTGTGGGAGTTCAAGGGCTAGCAGATGTGTTTTTGGCTTTGC 38933 Query 364496 TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAA 364555 | || |||| || || || || || ||| || || ||||||||||||| | Sbjct 38934 GC---TTGCCATTCGACTCTCCAGAGGCAAAACATCTCAACAAACAGATCTTTGAAACCA 38990 Query 364556 TGTATTTTGCCGCAATGACTGCTTCGTGTGA-TTTGGCAAAAACCAAGGGAAAGTACTCT 364614 | ||| ||| || | || |||| ||| || | |||||| | ||| | | ||| Sbjct 38991 TATATCATGCAGCTCTAACATCTTCAGTTGACTTAGCCAAAAAACTAGGTACA-TACGAG 39049 Query 364615 ACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674 ||||| ||||| ||||| ||| ||| | | || | ||| | ||| || || Sbjct 39050 ACTTACGAGGGCTCCCCCGCCTCGATGGGTGAGCTTCAATACGATATGTGGGGCGTTACA 39109 Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734 || | | | |||| | |||||| | || | | ||| || |||| ||| Sbjct 39110 CCTACAGACTTATGGGATTGGGATTCTTTAAAGGCTGAAATTAGGATTTATGGCCTTCGG 39169 Query 364735 AA---CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791 || || ||||| ||| || ||||| || || ||| || || || ||| Sbjct 39170 AATAGCTTACTCGT---AGCCCCAATGCCAACCGCAAGTACAAGTCAAATTCTTGGATTT 39226 Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAA 364851 || ||||| || || || | ||| ||| | || |||||||| ||| | | ||||| Sbjct 39227 AATGAGTGTTTTGAGCCATATACCTCTAATATATACTCACGCCGTGTTTTAGCAGGAGAG 39286 Query 364852 TTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGAC 364911 |||| | || ||| | || |||| ||||| || || | ||| ||| Sbjct 39287 TTTCAAATTGTAAATCCCTGGTTACTCAAAGATCTGGTAGATATGGGCTTATGGTCTGAT 39346 Query 364912 AGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCA 364971 | |||||| || ||||| | | | || ||| | ||||| || || ||||| Sbjct 39347 AACATGAAAAATCGCATCATATCTGATGGAGGCTCTATTCAGAATATATCAAATATTCCA 39406 Query 364972 GAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGAT 365031 | || | || | | |||||||| || ||||| || || ||| || | ||| | Sbjct 39407 GCCGAAATTAAAGCACTCTACAAAACAGTTTGGGAGATCTCACAGCGCACCATAATTCAG 39466 Query 365032 ATGGCGGCCGATCGCGGTGCTTTTAT 365057 ||||| || ||||| ||||| ||||| Sbjct 39467 ATGGCTGCTGATCGTGGTGCATTTAT 39492 >seq289 Length=19061 Score = 89.7 bits (98), Expect = 1e-12 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 131388 AGTTCTTATTATCGATGAAGTTTCTATGCTTGATGGAGAATTATTTAATAAACTTGAAAA 131447 |||||| |||||||| || || || ||| | ||||| ||||||||| ||||| | ||| Sbjct 3523 AGTTCTCATTATCGACGAGGTCTCAATGGTAGATGGCGAATTATTTGATAAATTAGAAGG 3582 Query 131448 AATCGCACAGAG-TATTCGATCAAATTCTAGACCATTTGGTGGAATTCAACTAATTCTCG 131506 || ||| |||| ||| || ||| ||||||||||| || |||||||| || | Sbjct 3583 TATTGCA-AGAGCTATGCGCAATAATGGCAGACCATTTGGCGGTATTCAACTTGTTATTA 3641 Query 131507 TTGGAGACTTTTATCAGCTACCACCTGT 131534 ||| || |||| |||| ||||||| || Sbjct 3642 CTGGCGATTTTTTTCAGTTACCACCAGT 3669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303254490141170