Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1477 96.9 3e-15 >seq1477 Length=21063 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCG 131077 ||| ||||||||||| | || || || || || |||||||| || | | | | | || Sbjct 16767 ACGAAGCACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAAAGTTCGGCC 16708 Query 131078 AGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTT 131137 | ||||| || || || ||||| | ||||| ||||| ||||||||||| |||||||||| Sbjct 16707 A-TCCTCAAGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGGAATTCCTTCTT 16649 Query 131138 TGTCGGTGATTTTCTGCTT--GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGT 131195 | || ||| ||| ||||| || | || | || || | ||||||| |||| || Sbjct 16648 TATCT-TGAATTT-TGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGACTTCGAGAGT 16591 Query 131196 AACGGTTTTACCGGT 131210 || ||||||||||| Sbjct 16590 AATAGTTTTACCGGT 16576 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| |||||||| || | ||||| |||||||| |||||||||||| | Sbjct 17006 CCACCGCGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTA 16947 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || ||||| || || |||| || | || |||||||| || Sbjct 16946 AGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGA 16887 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || ||| || |||| | || | ||||| | || || | Sbjct 16886 ATACCTTCTTTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACT 16827 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||||| || || | ||||| || || ||||||||| || Sbjct 16826 TCAAGAGTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTGCATGCCT 16776 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||| || |||| ||| | ||| || || ||||||||||||||||| | | Sbjct 16493 CCACCACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCAGAT 16434 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| || || ||||| || ||||||| | || || || || || Sbjct 16433 AAT-GTTCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTGG 16375 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||||| || | | || | || |||| ||||| | Sbjct 16374 AATTCCTTCCTTGTCCTGTATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTAC 16315 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 || | ||||| ||||||||| || Sbjct 16314 CTCAAGGGTAATGGTTTTACCAGT 16291 Score = 82.4 bits (90), Expect = 7e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| ||||| || ||||| || | || || || ||||| || ||||| ||| Sbjct 15939 CCACCGCGTAAACGTAGGACTAAGTGAAGAGTGGATTCTTTTTGTATATTGTAGTCGGAA 15880 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| | |||||| || ||| | || || | ||| ||||| || ||| Sbjct 15879 AGTGTTCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTCTGTTGGTCTGGTGGG 15820 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || ||||||||||| ||| ||| ||||| Sbjct 15819 ATGCCTTCTTTGTC-CTGAATTT-TGCTT 15793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471977782550400