Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq643 102 1e-16 >seq643 Length=60608 Score = 102 bits (112), Expect = 1e-16 Identities = 479/755 (63%), Gaps = 13/755 (2%) Strand=Plus/Minus Query 116241 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 116300 ||| ||||| || || ||||| || || | | ||||| || || | | ||| ||| Sbjct 38923 AAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATTGCTCTT 38864 Query 116301 TCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 116360 ||||| ||| ||||| |||| ||| || | |||| ||||| | || Sbjct 38863 ACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTAC 38804 Query 116361 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATA 116420 ||||| || |||||||| || | |||||||| | | || ||| ||||| Sbjct 38803 AACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 38744 Query 116421 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 116480 | || | || | || |||| |||||| |||| |||||| | | ||| || Sbjct 38743 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 38684 Query 116481 TATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 116540 | |||||| ||||| | ||| || || || || || | || |||||||| ||| Sbjct 38683 AACAATTTCGGTACAAAGATTAGAGCTACGGATAGTCCCGAGATTTTTTTGATTGCTCTT 38624 Query 116541 TGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 116600 | | ||||| ||||| |||||||||||| | || || || || || ||||| | | || Sbjct 38623 TTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGAT 38564 Query 116601 AATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTT---GGCTCGCCCCTCCTCCT 116656 || | | ||||| | | | || || | | | | | || ||| || | | Sbjct 38563 TATTGAGTACCATAGCTTTTG----TGCCATAATAGTTCTACGGCCTTTCCCTTCTTGTT 38508 Query 116657 CGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCC 116715 | |||||| || | |||||||| || || || ||| | || | || || || Sbjct 38507 CATACTTTTCATATAAAGCCTCAAATTCATCGCCATACA-CATCAGCTAGACCAGGACAT 38449 Query 116716 TTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCT 116775 | | || || | || | ||||| |||| | ||||| | |||||| ||||| || Sbjct 38448 TCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGATCA 38389 Query 116776 GGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGA 116835 || ||||| || || |||| ||||| || ||| ||||||| | || ||||| Sbjct 38388 GGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATTTTTG 38329 Query 116836 CGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 116895 || | || | || || | ||||| |||||||| || |||| || | |||| || Sbjct 38328 CGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAATGCT 38269 Query 116896 CCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGC 116952 ||| || | |||| | || | ||||| || || || || || || || ||| Sbjct 38268 CCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCGGAGC 38209 Query 116953 ATTGGAATGATACCATCAGATTGGCCATTTGTCCC 116987 || || | ||||||| || | |||||||| || Sbjct 38208 ATCGGTACAATACCATTTGAGTTTCCATTTGTTCC 38174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613461685434600