Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1135 118 2e-21 seq1477 96.9 8e-15 >seq1135 Length=44572 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || ||||| || || ||||||| ||||||||||| ||| ||| Sbjct 30897 CGAAGACGAAGTACGAGATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGACAATGTC 30838 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || || ||||| || || || | ||| || ||||| || ||| ||| Sbjct 30837 CGGCCGTCCTCGAGTTGTTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGGAATGCCT 30778 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || ||| || || |||| |||||| | || || || || | | Sbjct 30777 TCCTTATCTTGGATTTTTGATTTTACATTGTCGATGGTGTCCGATGACTCCACCTCAAGC 30718 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||||||||| |||||||| |||||||| Sbjct 30717 GTAATAGTTTTACCCGTGAGGGTTTTCACGAAAATTTG 30680 >seq1477 Length=21063 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | |||||||||||| |||||||| | |||||| || | ||| Sbjct 17000 CGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTAAGAGTA 16941 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| || |||||||| || ||||| | | || |||||||| ||| ||| Sbjct 16940 CGTCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGAATACCT 16881 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| || ||| || | || |||| | |||||| || | Sbjct 16880 TCTTTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACTTCAAGA 16821 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || | ||||| ||||| || || Sbjct 16820 GTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTG 16783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178831952222645