Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq643 123 3e-23 >seq643 Length=60608 Score = 123 bits (136), Expect = 3e-23 Identities = 411/630 (65%), Gaps = 21/630 (3%) Strand=Plus/Plus Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||| |||||||| | ||| |||||||| | || ||||| || || || || || || Sbjct 38173 AGGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGC 38232 Query 111962 GCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGA 112015 | ||||| | |||| ||| ||||| |||| | |||| | ||| | || Sbjct 38233 CAGATATGTTGATCAAGGTGGTAATAAGCGTCC---GGGAGCATTCGCTATATATTTGGA 38289 Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075 |||||||||||| ||||| | |||||||| || | || || || || | || || Sbjct 38290 GCCATGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGA 38349 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | || ||| || ||||| |||| || || ||||| || |||||||| |||||||||| Sbjct 38350 AGTTCG-TGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGAAGAGAG 38408 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGAT 112193 |||| | | ||| | ||| | || | || || | || | || ||||| | ||| Sbjct 38409 TTGAAAAAAATGGTGAATGGACCCTGATGTGCCCTTGTGAATG-TCCTGGTCTAGCTGAT 38467 Query 112194 GCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAG--TCGGGCG- 112250 | || || || ||||| || | || |||||| || ||||| | || || Sbjct 38468 GTGTATGGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGAAAGGCCGT 38527 Query 112251 ACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGAC 112309 | | | || || | | | | ||| | | || || | | ||||| || || Sbjct 38528 AGAACTATTATGGCA----CAAAAGCTATGGTACTCAATAATCGAAGCACAAACAGAAAC 38583 Query 112310 TGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 112369 |||||| || | |||||| |||||||| || ||||| ||||||| |||||||| ||| | Sbjct 38584 TGGTACCCCTTTTATGCTCTACAAAGATGCATGTAATAAAAAGAGCAATCAAAAAAATCT 38643 Query 112370 GGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 112429 || ||| || || || || ||||| ||||| | |||| || ||||| Sbjct 38644 CGGGACTATCCGTAGCTCTAATCTTTGTACCGAAATTGTTGAATACTCATCTCCGGATGA 38703 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489 |||||| ||||| | ||||| | ||| | || | ||||| || ||| || Sbjct 38704 AGTGGCTGTTTGTAATTTGGCATCCCTAGCTTTGCCGACCTATGTTAATACAGCTGATAA 38763 Query 112490 GACATTTGATTATGAAAAACTCCACGAAGT 112519 || ||||||| | | ||||| || || || Sbjct 38764 TACTTTTGATTTTCACAAACTTCATGATGT 38793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620696348673200