Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq643 174 2e-38 >seq643 Length=60608 Score = 174 bits (192), Expect = 2e-38 Identities = 614/945 (65%), Gaps = 37/945 (4%) Strand=Plus/Minus Query 106095 CCCACATATCAAATTGAAGC--ACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATA 106152 |||||||||| |||||||| |||| | | | || ||||| ||||| | ||||| || Sbjct 39101 CCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAG--CCCTCGTAAGTCTCGTA 39044 Query 106153 GGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTC 106212 | |||| | || || || ||| | || | ||| ||||| |||||||| Sbjct 39043 TGTACCTAGTTTTTTGGCTAAGTCAACTGAAGATGTTAGAGCTGCATGATATATGGTTTC 38984 Query 106213 AAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-- 106270 |||||| | || | | || || || || || |||| |||| |||| Sbjct 38983 AAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCG---CAAAGC 38927 Query 106271 -ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA 106329 | ||| ||||| || || |||||||| |||| | | || |||| ||| || | ||| Sbjct 38926 CAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATTGCT 38867 Query 106330 CTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 106386 ||| || || ||| || ||||| |||| ||||||| | || ||||| | Sbjct 38866 CTTACGAGCT---TCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCT 38810 Query 106387 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT 106446 |||| || || ||||||||||| | | |||||||||| | || ||| Sbjct 38809 AACTACAACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATT 38750 Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 ||||| | || | || | ||||||||||| ||||||||| |||||| | || Sbjct 38749 AACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGA 38690 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 ||| || | |||||| ||||| | || || || || ||||| | ||| ||||| || Sbjct 38689 GTATTCAACAATTTCGGTACAAAGATTAGAGCTACGGATAGTCCCGAGATTTTTTTGATT 38630 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 |||||||| || || ||||| ||||||||||| | || || || || || || |||| Sbjct 38629 GCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGC 38570 Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGG--CGTTGGCCCGTCCC-T 106682 | || |||| | ||| | | | | || | ||| | | |||| |||| | Sbjct 38569 TTCGATTATTGAGTACCATAGCTTTTG----TGCCATAATAGTTCTACGGCCTTTCCCTT 38514 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 | || |||||| || | || ||||| || || || | | || | ||||| | Sbjct 38513 CTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAG 38454 Query 106743 GTGCCTTGTC-TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAA 106801 | | || | || || | || | ||||| |||| | ||||| | |||||| || Sbjct 38453 G-ACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAG 38395 Query 106802 AGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTG 106860 || || || ||||| |||| | || ||||| | | || ||| | ||||| | || || Sbjct 38394 AGATCAGGTATCCAAAGGGCATAGAATAGATCACGTGCA-CGAACTTCTTCTTTGCCGTG 38336 Query 106861 GTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920 || || | || |||||||| | ||||| |||||||||||||| | ||| | || Sbjct 38335 ATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGC 38276 Query 106921 GATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 106974 || | |||| ||||| ||| |||||| ||||| | || || || || Sbjct 38275 GAATGCTCCC---GGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAA 38219 Query 106975 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCC 107019 || || ||||| || | |||||||| ||| | |||||||| || Sbjct 38218 GACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCC 38174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589937030799400