Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1878 136 5e-27 >seq1878 Length=35555 Score = 136 bits (150), Expect = 5e-27 Identities = 220/311 (71%), Gaps = 9/311 (3%) Strand=Plus/Minus Query 37399 TTGTTTCAATTGCTTTTAAGAGA-AAGttttttt--CTTCACTATCTGTTATATAAGTAT 37455 |||| || || || || || ||| ||||||||| ||| | ||| |||| ||||||| Sbjct 22552 TTGTCTCGATAGCATTGAAAAGATAAGTTTTTTGAGCTTGA---TCTTTTATGTAAGTAT 22496 Query 37456 CAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAA 37515 | |||| | ||| |||||||||| |||||||| || || ||||| ||||||| Sbjct 22495 CGATTAAAAGCGAATAAGTTTCAGAGTGGATATTTTCCATCATAATTTGAAATCCATAAA 22436 Query 37516 AACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAA 37575 | | ||||| |||| | || || || | ||||| || | | ||||||||||| Sbjct 22435 AGAATCTAGCCTCAGGAATCTGCACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAA 22376 Query 37576 CTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT 37635 | ||||| || || ||||| || || || |||| |||||| | || |||||||| Sbjct 22375 CAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGAGATATAAAGTATCGTTCATCAT 22316 Query 37636 --TTGATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCC 37692 |||| | || |||||||| | |||||||| || ||||||| || ||| | |||| Sbjct 22315 CATTGAGACGGTTATTCCAATCGTGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCC 22256 Query 37693 AAAAACTTGCC 37703 ||||| |||| Sbjct 22255 AAAAAGATGCC 22245 Score = 96.9 bits (106), Expect = 4e-15 Identities = 300/460 (65%), Gaps = 6/460 (1%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| ||||| |||||||| || || |||||| |||||||||| || ||||| || | Sbjct 23127 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 23068 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGA--TTAGATGTATTATATATAGTACTACAT 36989 | || ||||||||||| |||||||||||| || || | |||| | | | | | Sbjct 23067 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGA--ATTT 23010 Query 36990 GATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAG 37049 ||| ||||| | ||| ||||| ||||| ||||| | ||| || | Sbjct 23009 CCTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCG 22950 Query 37050 TTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACA 37109 || || || | ||| ||| | || || |||||| || |||||| || Sbjct 22949 TTCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACG 22890 Query 37110 GCATCTTTAACTATATTAACAATA-ACTTCTTCAGTTGGGGGATATTTTAAATATTTAAA 37168 || | | | | | || || | ||| ||| || ||| | || |||| | ||| Sbjct 22889 GCTTGTGTGATAACATCCTGAACAGACTGCTT-AGATGGTCTGTGCTTCAAATGTGAAAA 22831 Query 37169 CAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAA 37228 | | ||| ||||| || |||| ||||| || | || | ||| |||||||| Sbjct 22830 GAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAA 22771 Query 37229 GGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGA 37288 ||||| || | ||| || |||| ||| || | |||||| || | ||||| || ||| Sbjct 22770 GGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACT 22711 Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT 37328 || || || || || ||||| ||||| |||||||||||| Sbjct 22710 GAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGT 22671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592272857497400