Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq1477 131 3e-25 seq1135 102 1e-16 >seq1477 Length=21063 Score = 131 bits (144), Expect = 3e-25 Identities = 142/186 (76%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAA-CATAACGATACTATTCAAAATGTAAAAAA 146113 || || ||||| ||||| |||| ||||| ||| ||| || ||| | ||||| |||| Sbjct 16291 ACTGGTAAAACCATTACCCTTGAGGTAGAGTCATC-CGACACCATTGATAATGTGAAAAG 16349 Query 146114 TAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAA 146173 ||||||||| || ||||| ||||||||||||||||||||| | || ||||| || || Sbjct 16350 TAAAATACAGGACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAA 16409 Query 146174 ACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCA 146233 |||| | || ||| | |||| ||| | ||||| || || ||||||||||| || | || Sbjct 16410 ACAACTTGAGGATGGTCGAACATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCA 16469 Query 146234 TTTAGT 146239 | |||| Sbjct 16470 TCTAGT 16475 Score = 127 bits (140), Expect = 3e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAAT 146114 || |||||||| || ||| | || || || || || || | |||||||||| | Sbjct 16015 ACTGGAAAAACCATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGT 16074 Query 146115 AAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAA 146174 ||||||||| |||||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct 16075 AAAATACAAGACAAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTTGCTGGAAAA 16134 Query 146175 CAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234 ||| | || || | |||| | | || ||||| || |||||||||||||| |||| Sbjct 16135 CAACTTGAGGACGGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCAC 16194 Query 146235 TTAGT 146239 || || Sbjct 16195 TTGGT 16199 Score = 109 bits (120), Expect = 9e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAA-CATAACGATACTATTCAAAATGTAAAAAA 146113 || || ||||| || || |||| || ||| ||| |||||||| | |||||||||| Sbjct 15737 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCT-GATACTATCGACAATGTAAAAAG 15795 Query 146114 TAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAA 146173 ||||| || ||||||||||| ||||| || ||||| ||| | ||||| || || || Sbjct 15796 CAAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAA 15855 Query 146174 ACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCA 146233 || || || ||| |||| | | || || ||||||||||||||||| ||| | || Sbjct 15856 GCAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTCA 15915 Query 146234 TTTAGTATTACGATTAAGAGGAGG 146257 ||||| |||| ||| | || || Sbjct 15916 CTTAGTCCTACGTTTACGCGGTGG 15939 >seq1135 Length=44572 Score = 102 bits (112), Expect = 1e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | ||||| | || || ||||| ||||| |||| || || ||| Sbjct 30678 TGCAAATTTTCGTGAAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCG- 30736 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||||||||| ||||| ||| ||| |||||||||||||| || ||| Sbjct 30737 GACACCATCGACAATGTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAA 30796 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | |||||||| || |||||| | || || | || || | || || || Sbjct 30797 CAACGTTTGATTTTTGCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAAC 30856 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTA 146240 || ||||||||||| ||| | ||| | ||| Sbjct 30857 ATCCAAAAAGAATCTACTCTTCATCTCGTA 30886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786108076280200