Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1477 113 4e-20 seq1135 107 2e-18 >seq1477 Length=21063 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || || || | ||| | ||||| || | || ||||| |||||||||||||||||| Sbjct 17009 TGACCACCGCGAAGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCG 16950 Query 137242 CTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 137300 | | || | || | ||||| ||||| || |||||| |||||| | ||| || || || Sbjct 16949 TTAAGAGTACGTCCA-TCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGG 16891 Query 137301 AGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTC 137360 || || |||||||| || || || ||| | | || | || |||| | ||| Sbjct 16890 TGGAATACCTTCTTTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTC 16831 Query 137361 TACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||||||| ||| | || || || ||||||||||| || ||||| ||||| Sbjct 16830 TACTTCAAGAGTTATTGTTTTCCCAGTCAATGTTTTGACAAATATCTGCAT 16780 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | ||||| ||||| |||||||||||||| |||||||||| | Sbjct 16493 CCACCACGAAGACGGAGAACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAAT--CAG 16436 Query 137245 ATTGTGCTCGA--GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 || || |||| || || |||||||| |||||| |||| | | ||| |||||||| | Sbjct 16435 ATAATGTTCGACCATCCTCAAGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTG 16376 Query 137303 GTATGCCTTCTTTGTC 137318 | || ||||| ||||| Sbjct 16375 GAATTCCTTCCTTGTC 16360 >seq1135 Length=44572 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | ||| | || | ||||| |||||||||||||| |||||||| || | Sbjct 30903 CCTCCACGAAGACGAAGTACGAGATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 30844 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||| ||||||||||| || ||| | |||| |||||| || || || || Sbjct 30843 AATGTCCGGCCGTCCTCGAGTTGTTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTGGA 30784 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||| || || |||||| ||||| | || | ||||| | | || || Sbjct 30783 ATGCCTTCCTTATCTTGGATTTTTGATTTTACATTGTCGATGGTGTCCGATGACTCCACC 30724 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | || || || || | ||||| ||||| |||||||| Sbjct 30723 TCAAGCGTAATAGTTTTACCCGTGAGGGTTTTCACGAAAATTTGCAT 30677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488507756142000