Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq643 262 9e-65 seq3207 100 7e-16 >seq643 Length=60608 Score = 262 bits (290), Expect = 9e-65 Identities = 538/798 (67%), Gaps = 9/798 (1%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 |||||||| ||||| ||||| ||| | | ||| | ||||| |||||| | || | Sbjct 37817 TATTTTGGCTTCAAGACTCTGGAAAGATCATATCTTCTTCGCCTCAATGATAAAATTGTG 37876 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || || || ||||| ||| | | ||||| || |||| ||||| | |||| ||| || Sbjct 37877 GAGCGGCCACAACATATGATAATGCGTGTCGCTGTTGGAATTCACCAAGATGACATTGAA 37936 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 ||| ||| || |||| || || | || || | || |||||| | ||||| Sbjct 37937 TCTGCTATAGAGACTTATAATCTAATGTCCAATAAATACTTTACGCATGCTTCCCCTACT 37996 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 |||||| || || ||| | ||| | |||| |||||| | | | || || Sbjct 37997 CTATTTGCAGCCGGTACTCCACAATCTCAACTCTCTTCATGCTTTTTAATTGATATGAAA 38056 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT---GCTCTTATTTCTAAA 110600 || ||| |||||| || || || ||| || | ||| ||| ||| | ||||||||| Sbjct 38057 GAGGATAGTATTGATGGAATCTACGATACTTTGAAA---ACTTGCGCTATGATTTCTAAA 38113 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 || | || || ||||| | | ||||| |||||| | | ||| || |||||||| Sbjct 38114 AATGCCGGTGGTATTGGCTTAAATATTCATCGGATTCGCGCGACAGGTGCTTATATCGCA 38173 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | | || || |||| ||| |||| || ||| | |||||||||| | ||||| Sbjct 38174 GGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCC 38233 Query 110721 AAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCT 110777 | |||||| ||||||||||||| | | || |||| ||||| ||| | || || Sbjct 38234 AGATATGTTGATCAAGGTGGTAATAAGCGTCCGGGAGCATTCGCTATATATTTGGAGCCA 38293 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||| | ||||||||||| ||| | || || || |||||||| || |||||| Sbjct 38294 TGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAAGTT 38353 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 | ||||||||| |||| ||||| | ||||| | ||| | || ||||| | ||| || Sbjct 38354 CGTGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGAAGAGAGTTGAA 38413 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 ||||||| ||| | || ||||| ||| | | |||||||||| ||||||| ||| Sbjct 38414 AAAAATGGTGAATGGACCCTGATGTGCCCTTGTGAATGTCCTGGTCTAGCTGATGTGTAT 38473 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAA 111017 || | || ||||| | | || ||||| |||||| ||||||| || || | | Sbjct 38474 GGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGAAAGGCCGTAGAACT 38533 Query 111018 ATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCT 111077 ||| || ||| | || |||| | ||| | ||| ||||| |||||||| || ||| Sbjct 38534 ATTATGGCACAAAAGCTATGGTACTCAATAATCGAAGCACAAACAGAAACTGGTACCCCT 38593 Query 111078 TATATTTTGTATAAAGAT 111095 | ||| | || |||||| Sbjct 38594 TTTATGCTCTACAAAGAT 38611 >seq3207 Length=6937 Score = 100 bits (110), Expect = 7e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352 |||||||||| || ||| | | || |||| ||||| || |||||||||||||| Sbjct 4876 TGATATTGTTGAGAGGCATCTAGAAGATGGTGATATTGTTCTCTTTAATAGGCAACCATC 4817 Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCG 305412 || ||||| | ||| ||| |||| | || || || | | || ||| | Sbjct 4816 CCTTCATAAGCTTAGTATCATGAGTCATTATGTAAAGGTTAGGCCATGGCGAACCTTTAG 4757 Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472 ||| || | |||| ||||||||||| ||||| || ||||||||||||||||||||| | Sbjct 4756 ATTGAACGAGTGTGCCTGTACGCCTTACAATGCAGACTTTGATGGAGATGAAATGAATCT 4697 Query 305473 GCATGTACCTCAA 305485 || ||||||||| Sbjct 4696 ACACGTACCTCAA 4684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186722552158535