Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1477 96.9 8e-15 seq1135 84.2 5e-11 >seq1477 Length=21063 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT--AAAGC 206251 || || ||||| || ||| | ||||| || ||||||||| | || || ||||| Sbjct 16576 ACCGGTAAAACTATTACTCTCGAAGTCGAGTCTTCTGACACCATTGATAACGTCAAAAGC 16635 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 |||| ||||||| |||||||||||| |||||| || || | || || || |||| Sbjct 16636 AAAA--TTCAAGATAAAGAAGGAATTCCTCCGGACCAACAGCGATTAATATTTGCAGGAA 16693 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 | || | || ||||| | ||||| | || |||||| |||||||||| || ||||||| Sbjct 16694 AACAACTTGAGGATGGCCGAACTTTATCAGACTACAACATCCAGAAAGAATCCACTCTTC 16753 Query 206372 A 206372 | Sbjct 16754 A 16754 Score = 84.2 bits (92), Expect = 5e-11 Identities = 129/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAA--GC 206251 || || ||||| || || | ||||| ||| ||||| || |||| ||||| || Sbjct 15737 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 15796 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 |||| |||| || |||||||| || || ||| || ||| | || ||||| |||| Sbjct 15797 AAAA--TTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAA 15854 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 |||||||||| ||||| | || | |||| ||||| | || ||||| || ||||||| Sbjct 15855 AGCAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTC 15914 Query 206372 AC 206373 || Sbjct 15915 AC 15916 >seq1135 Length=44572 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| || || | || ||||| || ||||| |||| Sbjct 30692 AAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCGGACACCATCGACAAT 30751 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| ||| || ||||| || ||||| ||| || ||| ||| | | || || Sbjct 30752 GTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAACAACGTTTGATTTTT 30811 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| || | || || || |||| ||| | || |||||| |||| ||||| ||| Sbjct 30812 GCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAACATCCAAAAAGAATCT 30871 Query 206365 ACTCTTCACCTTGT 206378 |||||||| || || Sbjct 30872 ACTCTTCATCTCGT 30885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181730931761135