Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1135 154 1e-32 seq1477 127 2e-24 >seq1135 Length=44572 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GC 134544 |||||| | || || | ||||| || || || ||||| ||||| ||||||||||| | Sbjct 30904 TCCTCCACGAAGACGAAGTACGAGATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGA 30845 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| | | | ||| ||||| ||||| || |||||||||||||| || || || || | Sbjct 30844 CAATG-TCCGGCCGTCCTCGAGTTGTTTTCCCGCAAAAATCAAACGTTGTTGGTCAGGTG 30786 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || ||||| |||||| ||| || ||| | ||||| || || |||| Sbjct 30785 GAATGCCTTCCTTATCTTGGATTTTTGATTTTACATTGTCGATGGTGTCCGATGACTCCA 30726 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| |||||||| || | ||||| |||||||||||||| Sbjct 30725 CCTCAAGCGTAATAGTTTTACCCGTGAGGGTTTTCACGAAAATTTGCAT 30677 >seq1477 Length=21063 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| || || | ||| | || || |||||||| || || ||||||||||| | Sbjct 16778 CCTCCTCTTAGACGAAGCACTAAATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 16719 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || || ||||| |||||||| || || ||||| || || || || Sbjct 16718 AAAGTTCGGCCA-TCCTCAAGTTGTTTTCCTGCAAATATTAATCGCTGTTGGTCCGGAGG 16660 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||||||||| |||||| || | ||||| || || || || Sbjct 16659 AATTCCTTCTTTATCTTGAATTTTGCTTTTGACGTTATCAATGGTGTCAGAAGACTCGAC 16600 Query 134666 GTCGAGAGTAATGGTTTTACCGGT 134689 ||||||||||| ||||||||||| Sbjct 16599 TTCGAGAGTAATAGTTTTACCGGT 16576 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || ||||||||||| |||||||| ||| || || | Sbjct 16997 AGACGAAGCACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTAAGAGTACGT 16938 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || || || || || ||||| ||||| | || || || || || || |||||| Sbjct 16937 CCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGAATACCTTCT 16878 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || |||||| ||| | ||| || || ||||| || || ||||| Sbjct 16877 TTATCTTGGATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACTTCAAGAGTT 16818 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || ||||| || || || ||||| Sbjct 16817 ATTGTTTTCCCAGTCAATGTTTTGACAAATATCTGCAT 16780 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || ||||| |||||||||||||| || | || || || || Sbjct 16475 ACTAGATGAAGGGTAGATTCTTTTTGAATGTTGTAATCAGATAATGTTCGACCATCCTCA 16416 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || |||||||| ||||| || || | || |||||||| || || ||||| || || || Sbjct 16415 AGTTGTTTGCCAGCAAAGATTAATCTTTGTTGATCGGGTGGAATTCCTTCCTTGTCCTGT 16356 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||| || || | |||||||| || || || || || |||||||||||| Sbjct 16355 ATTTTACTTTTCACATTATCAATGGTGTCGGATGACTCTACCTCAAGGGTAATGGTTTTA 16296 Query 134685 CCGGT 134689 || || Sbjct 16295 CCAGT 16291 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || |||||||| ||||| || ||||||||| || || | || || | ||| Sbjct 15916 GTGAAGAGTGGATTCTTTTTGTATATTGTAGTCGGAAAGTGTTCGGCCATCCTCCAACTG 15857 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || |||||||| | ||| || || || || ||||||||||| || |||||||| Sbjct 15856 CTTTCCAGCGAAAATCAATCTCTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGAATTTT 15797 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| || ||| | || || || ||||| || || || || || ||||| || || Sbjct 15796 GCTTTTTACATTGTCGATAGTATCAGATGATTCGACTTCAAGGGTTATAGTTTTGCCAGT 15737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505360905756200