Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq643 625 4e-174 seq1878 197 2e-45 >seq643 Length=60608 Score = 625 bits (692), Expect = 4e-174 Identities = 1391/2066 (67%), Gaps = 51/2066 (2%) Strand=Plus/Minus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || |||||||| || | ||||| | | |||||||| |||||||| |||||||| | Sbjct 39639 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCGGTTTTTAAG 39580 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 |||| ||||||| |||||||||||||||| |||| | |||| || | Sbjct 39579 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 39520 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTT---TT 68550 ||||||||||| || || ||||| || || || || | ||| || ||||| | || Sbjct 39519 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 39460 Query 68551 ATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGA 68610 || | | || | ||| || ||||||| || || | | ||| || || ||||| Sbjct 39459 ATGGTGCGCTGT-GAG--ATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGA 39403 Query 68611 AGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCA 68667 | | | |||| ||||| || || ||||| ||||| || ||| || || | |||| Sbjct 39402 ATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCA 39343 Query 68668 TTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCC 68727 ||| || | || | | || | || | ||||| || |||||||| || Sbjct 39342 GACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCT 39283 Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787 || | ||| || | || | ||| |||||| ||||||||| || | | | |||||| | Sbjct 39282 CCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAAT 39223 Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847 || ||||||||| || ||| |||||||| || || || | ||| ||||| | ||| Sbjct 39222 CCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGG 39163 Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907 |||| | | |||| | | |||| | | ||||||||| | || | ||| ||| Sbjct 39162 CCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACG 39103 Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967 ||| | ||||||||| || || | || || || | || || || || Sbjct 39102 CCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTAT 39043 Query 68968 GGTCCTTCCTGTTCAGCTAGTTCACAACTT--GCCTCTAATGCACCGTAATAAATTGTTT 69025 | ||| | || |||| ||| ||| | || || | | ||| || |||| Sbjct 39042 GTACCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTT 38985 Query 69026 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAA 69085 | || |||| || ||||||| || ||| ||| || |||||||| | | ||| | Sbjct 38984 CAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCA 38925 Query 69086 TAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAAC 69145 ||| ||||||| | || ||||| || | | | || |||| || | | | ||| | Sbjct 38924 AAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCG-TAAATTGCTC 38866 Query 69146 TTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACT 69204 || | |||||| || | |||||| ||||||| ||| || |||||||| ||||| | ||| Sbjct 38865 TTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACT 38806 Query 69205 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TAT-AACA 69258 || || | | || || | |||||| |||||||||| ||| ||| |||| Sbjct 38805 ACAACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACA 38746 Query 69259 AACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATAT 69318 | | || |||| ||||| | ||||||||| || || |||| | | || ||| Sbjct 38745 TAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTAT 38686 Query 69319 TGTATTATCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375 | | || || ||||| |||||| |||| ||||||||| ||||||| ||||| Sbjct 38685 TCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTG 38629 Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435 |||||||| ||||| || || ||||| || ||||| || ||||||||||| | || | | Sbjct 38628 CTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCT 38569 Query 69436 TCGATAATAGATTTCCAAACGA------CCCTAGCATTTATTACGGTCTTGTAACGCTTC 69489 ||||| || || | ||| | || || | || | |||| ||| | |||| Sbjct 38568 TCGATTATTGAGTACCATAGCTTTTGTGCCATAATAGTTCT-ACGGCCTTT---CCCTTC 38513 Query 69490 TCTTTTTCATATTGTGTATATA--GCCGTTCGAATTCATCTCCCCAAACATCATCCAATC 69547 | | |||||| | | ||||| ||| || |||||||| || | |||||| | | | Sbjct 38512 T--TGTTCATACTTTTCATATAAAGCC--TCAAATTCATCGCCATACACATCAGCTAGAC 38457 Query 69548 CAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAA 69607 ||||||||||| || ||||||| | ||| || ||| | | ||||| ||||||| Sbjct 38456 CAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAA 38397 Query 69608 ATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 | ||||| || |||||||| || ||| || ||||| | | | | |||||| || || Sbjct 38396 AGAGATCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCG 38338 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 |||||| || ||||| ||||| | ||||| | |||||||| || | |||||| Sbjct 38337 TGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATA 38278 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | ||||||| || ||||| || || ||||| | ||||||||||| ||||| || Sbjct 38277 GCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAG 38218 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 |||| |||||||| | ||||||||| || || ||||||||||| | |||||| ||| Sbjct 38217 ACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCT 38158 Query 69847 CTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 | |||||||| | |||| || || || || || || ||||||| || | ||| Sbjct 38157 GTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCG 38098 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 ||| |||||| || || || || || || || ||||| ||| |||| | || | ||| Sbjct 38097 CAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAG 38038 Query 69967 CAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 || ||| | |||| ||| ||| || || ||||| ||||| || || || || Sbjct 38037 CATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTA 37978 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGA 70086 || |||| | || | ||||| || || || ||||| ||||| || || || ||| Sbjct 37977 AAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGA 37918 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 ||||| | ||||||||||| | |||||| || || || || || |||||| ||| | Sbjct 37917 ATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGAGG 37858 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206 | || |||||| |||||||||| || || |||||||| | ||| |||||||| Sbjct 37857 CGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGA 37798 Query 70207 TCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATC---CATAACA 70263 || |||| || | ||||| || | | | | || || |||| | || ||| | | Sbjct 37797 TCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACAT-AGA 37739 Query 70264 GTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCT 70323 | | | ||| || |||||| ||| |||||||| ||||| ||||| | | | | ||| Sbjct 37738 TTTGCT--GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCA 37681 Query 70324 TCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTG 70383 | || | | ||| ||||||||||| ||||||| ||| || | ||||| | Sbjct 37680 GAGACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGT 37621 Query 70384 GCTGCTAGAATAGCATAGTCAGGATG 70409 ||||| |||||||| ||||| ||||| Sbjct 37620 GCTGCAAGAATAGCGTAGTCGGGATG 37595 >seq1878 Length=35555 Score = 197 bits (218), Expect = 2e-45 Identities = 590/921 (64%), Gaps = 72/921 (8%) Strand=Plus/Minus Query 39310 TGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCC 39369 || ||| ||||| ||||| || ||||| || ||||| |||||||| ||||| || || Sbjct 23130 TGCCATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCC 23071 Query 39370 TTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAA 39429 |||| || |||||||||||||||||||| ||||| | | || ||| ||| | Sbjct 23070 AGCCAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATT 23011 Query 39430 TCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 |||||| | | || ||||||||| ||||| ||||| ||||||| Sbjct 23010 TCCTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGC 22951 Query 39490 ATTCATTCCTATGAGTTTAAC---TGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTC 39546 ||||| || |||| | | ||| || || || |||||||| |||| ||| || || Sbjct 22950 GTTCATGCC---GAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTC 22894 Query 39547 TACGGCCTCTGTTATTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGT 39604 ||||| | ||| || | || | || || | | ||| ||| |||||| Sbjct 22893 GACGGCTTGTGTGATAAC--ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGT 22836 Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664 ||| | | || || ||||| |||||||| || || | ||| | ||||||| Sbjct 22835 GAAAAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTA 22776 Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 ||||| || || |||| ||| | || || || || | |||||| |||| |||||| || Sbjct 22775 GAAAAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAA 22716 Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA 39784 ||| || || || || || ||||| ||||| || ||||| | | ||| | | | Sbjct 22715 CCACTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGAC 22656 Query 39785 TCATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA----- 39836 || || | | ||||| ||||| |||| || ||||| | |||||| | Sbjct 22655 TCTTTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATG 22596 Query 39837 -------------------------------------------TTGTTTCTATAGCATTA 39853 |||| || |||||||| Sbjct 22595 AATCGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTG 22536 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 || |||||| ||||| | | |||||| | || ||||| ||||| || ||| || Sbjct 22535 AAAAGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTT 22476 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || ||||| ||||| ||| || |||||||| ||||| |||| || |||| ||| Sbjct 22475 TCAGAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATC 22416 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | ||| | || | | |||||||| || || || || |||||| Sbjct 22415 TGCACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCA 22356 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTATT 40086 ||||| || | ||||| ||||| ||| |||||| ||| | ||||| Sbjct 22355 AAAAAGGCTAGCACATGAGATATAAAGTATCGTTCATC----ATCATTGAGACGGTTATT 22300 Query 40087 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146 ||| || | ||||||||| || | ||| | || ||||| |||||||| || ||||| || Sbjct 22299 CCAATCGTGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGC 22240 Query 40147 CTTTTTGTACATGTTCCATAT 40167 ||||||||||| | |||||| Sbjct 22239 TTTTTTGTACATATGCCATAT 22219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686857839953400