Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq643 134 2e-26 >seq643 Length=60608 Score = 134 bits (148), Expect = 2e-26 Identities = 413/629 (66%), Gaps = 21/629 (3%) Strand=Plus/Plus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || |||||||| | ||| |||||||| | || ||||| || || || || || || Sbjct 38174 GGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCC 38233 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 | ||||| |||||| ||| ||||| |||| | |||| | ||| | ||| Sbjct 38234 AGATATGTTGATCAAGGTGGTAATAAGCGTCC---GGGAGCATTCGCTATATATTTGGAG 38290 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 ||||||||||| ||||| | |||||||| || | || || || || | || || Sbjct 38291 CCATGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAA 38350 Query 104687 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 | || ||| || ||||| |||| || || ||||| || |||||||| ||||||||||| Sbjct 38351 GTTCG-TGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGAAGAGAGT 38409 Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGATG 104804 ||| | | ||| | ||| | || | || || | || | |||||||| | |||| Sbjct 38410 TGAAAAAAATGGTGAATGGACCCTGATGTGCCCTTGTGAATG-TCCTGGTCTAGCTGATG 38468 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG--TCGGGCG-A 104861 || || || ||||| || | || |||||| || ||||||| || || | Sbjct 38469 TGTATGGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGAAAGGCCGTA 38528 Query 104862 CTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 104920 | | || || | | | | ||| | | || || | | ||||| || ||| Sbjct 38529 GAACTATTATGGCA----CAAAAGCTATGGTACTCAATAATCGAAGCACAAACAGAAACT 38584 Query 104921 GGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 104980 ||||| || | ||||| |||||||| || ||||| ||||||| |||||||| ||| | Sbjct 38585 GGTACCCCTTTTATGCTCTACAAAGATGCATGTAATAAAAAGAGCAATCAAAAAAATCTC 38644 Query 104981 GGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 || ||| || || ||||| ||||| ||||| | |||| || ||||| Sbjct 38645 GGGACTATCCGTAGCTCTAATCTTTGTACCGAAATTGTTGAATACTCATCTCCGGATGAA 38704 Query 105041 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG 105100 |||||| ||||| | ||||| | ||| | || | ||||| || ||| || Sbjct 38705 GTGGCTGTTTGTAATTTGGCATCCCTAGCTTTGCCGACCTATGTTAATACAGCTGATAAT 38764 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGT 105129 || ||||||| | | ||||| || || || Sbjct 38765 ACTTTTGATTTTCACAAACTTCATGATGT 38793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583217529339400