Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq643 111 2e-19 >seq643 Length=60608 Score = 111 bits (122), Expect = 2e-19 Identities = 195/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||| ||||| | || || || || || |||||||||||| ||| || | Sbjct 38478 TCGCCATACACATCAGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCA 38419 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | || ||||| ||| ||| ||||| || || ||||| ||||| ||| || || || Sbjct 38418 TTTTTTTCAACTCTCTTCATAAAGAGATCAGGTATCCAAAGGGCATAGAATAGATCACGT 38359 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 ||| | || || | ||| || || || || ||||| || || | || |||||| Sbjct 38358 GCACGAACTTCTTCTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCG 38299 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||||| ||| || ||||| | ||| ||||| || || || | || Sbjct 38298 TGCCATGGCTCCAAATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACA 38239 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCC 79589 || | ||| || || ||||| ||||||||||| || || || || Sbjct 38238 TATCTGGCAGTATTATTGAAGACTCGGAGCATCGGTACAATACC 38195 Score = 107 bits (118), Expect = 2e-18 Identities = 194/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 ||||| || || |||||||| |||||||| || || ||||| || || | || || || Sbjct 38195 GGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCCAGATATGTTGATCAAGGTGGT 38254 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 || || ||| | ||||| || || | |||||||||||||| || | | || Sbjct 38255 AATAAGCGTCCGGGAGCATTCGCTATATATTTGGAGCCATGGCACGCCGATATATTTGAG 38314 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 |||||||| || ||| || || || | || || | || || || || ||| Sbjct 38315 TTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAAGTTCGTGCACGTGATCTATTCTAT 38374 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 ||| | ||||| || || || || ||| ||| ||||| || | | |||||| |||| Sbjct 38375 GCCCTTTGGATACCTGATCTCTTTATGAAGAGAGTTGAAAAAAATGGTGAATGGACCCTG 38434 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 |||||||| ||||| ||||| ||| | || || || ||||| Sbjct 38435 ATGTGCCCTTGTGAATGTCCTGGTCTAGCTGATGTGTATGGCGA 38478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548484106316400