Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1477 120 3e-22 >seq1477 Length=21063 Score = 120 bits (132), Expect = 3e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 ||||| ||||| || || | |||||| | ||||| | || ||| ||||| || ||| Sbjct 16303 ATTACCCTTGAGGTAGAGTCATCCGACACCATTGATAATGTGAAAAGTAAAATACAGGAC 16362 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || ||||| || |||||||||||||| | ||||| | || ||||||||| | || || Sbjct 16363 AAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAGGA- 16421 Query 27144 AGTTCGACCGTT-TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 | |||| | || || ||||||||||||||||| || || ||| | ||| | ||| | || Sbjct 16422 TGGTCGAACATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCATCTAGTTCTCCG 16481 Query 27203 TTTGCGGGGTGGCAT 27217 | | || ||||| || Sbjct 16482 TCTTCGTGGTGGTAT 16496 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| ||||| |||| || || | || ||||||||||| ||| | || Sbjct 16779 CATGCAGATATTTGTCAAAACATTGACTGGGAAAACAATAACTCTTGAAGTAGAATCTTC 16838 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | |||||| || || ||||| |||||||| || ||||| || || Sbjct 16839 AGATACAATAGACAACGTCAAAAGTAAGATCCAAGATAAAGAAGGTATTCCACCGGACCA 16898 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || || ||| | ||||| | || || ||||||||| Sbjct 16899 ACAAAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTAACGATTACAA 16958 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| |||||||| ||||| | || || || | ||| | || ||||| Sbjct 16959 CATACAAAAGGAATCGACTCTCCACTTAGTGCTTCGTCTTCGCGGTGG 17006 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||| || |||||||||| ||||| || | || ||| | ||||| | |||||| Sbjct 16576 ACCGGTAAAACTATTACTCTCGAAGTCGAGTCTTCTGACACCATTGATAACGTCAAAAGC 16635 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 ||||||||||| |||||||| || || || || |||||||| ||||||| || || ||| Sbjct 16636 AAAATTCAAGATAAAGAAGGAATTCCTCCGGACCAACAGCGATTAATATTTGCAGGAAAA 16695 Query 27132 CAATTGGAAGACAGTTCGACCGTT-TCCGATTACAACATTCAAAAGGAGTCGACCTTACA 27190 ||| | || || | ||| | || || || |||||||| || || || || || | || Sbjct 16696 CAACTTGAGGA-TGGCCGAACTTTATCAGACTACAACATCCAGAAAGAATCCACTCTTCA 16754 Query 27191 TTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || | ||| | | || ||||| Sbjct 16755 TTTAGTGCTTCGTCTAAGAGGAGGCAT 16781 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || ||||| || || || |||| ||| | || || | || ||| ||||| |||||| Sbjct 16027 ATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGTAAAATACAAGAC 16086 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 |||||||| || |||||||||||||| | |||| | || || |||||| | || ||| Sbjct 16087 AAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTTGCTGGAAAACAACTTGAGGAC 16146 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || |||| || || ||||| ||||| || ||||| | || ||||| | ||| Sbjct 16147 GGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCACTTGGTCCTTCGT 16206 Query 27204 TTGCGGGGTGGCAT 27217 | || |||||||| Sbjct 16207 CTTCGTGGTGGCAT 16220 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || ||||| |||| || |||||||| ||| | || || | || || | || ||| Sbjct 15737 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 15796 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 |||||||| |||||||||||||| ||||| || |||||| | || || | ||| || || Sbjct 15797 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 15856 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || ||||| || | || ||||||| ||||| || ||||| || || || | || Sbjct 15857 CAGTTGGAGGATGGCCGAACACTTTCCGACTACAATATACAAAAAGAATCCACTCTTCAC 15916 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | ||||| || ||||| || Sbjct 15917 TTAGTCCTACGTTTACGCGGTGGAAT 15942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434886134491200