Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1878 221 1e-52 >seq1878 Length=35555 Score = 221 bits (244), Expect = 1e-52 Identities = 593/910 (65%), Gaps = 65/910 (7%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||| || || |||||| |||||||| || ||||| || || | || || |||||| Sbjct 23114 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 23055 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACA--A 4374 ||||| |||||||| ||||| | | ||||| | ||| | | || | | | | | Sbjct 23054 TCCATGAAATCAAATGGATTTTTGACTTTGTA-TACTTTGGA-ATTTCCTAACGAGAGGA 22997 Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434 | | ||| || || || ||||| || ||||| |||| || | ||| || || | || Sbjct 22996 GAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCCGAGTA 22937 Query 4435 -ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 | | || || ||||| | || | ||| ||||||||||| ||||||| |||||| Sbjct 22936 GAGCGCAT-GGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATA 22878 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 | ||| | | | ||||||||| | | || | | ||| | | ||| ||| Sbjct 22877 ACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCA 22818 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || || | |||||||| | ||| |||||||||||||| |||| || | | Sbjct 22817 AAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCC 22758 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || || |||| || || | |||||| || | ||||| || ||| || ||||| || Sbjct 22757 ATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCC 22698 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAA---CGAGCTGGCTTTGTCTTTAATC 4730 || || || ||||| ||||| | || || || ||| || ||||||||| |||| Sbjct 22697 TCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGA-CT--CTTTGTCTTGAATC 22641 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT------------ 4778 || | ||||||| || |||||||||| || || | | || || Sbjct 22640 CAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTTAACGATTA 22581 Query 4779 ------------------------------------ATAGCGTTAAATAATTTACTTTTT 4802 ||||| || || | | | ||||| Sbjct 22580 TCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGATAAGTTTTT 22521 Query 4803 TCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTT 4862 | | | | |||| || ||||| || |||| || ||| ||||||| || |||||| Sbjct 22520 TGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAGAGTGGATATTT 22461 Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922 || || ||| |||||||| |||||| ||||||| || | | || ||||| | | | Sbjct 22460 TCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACTGCTA 22401 Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACA 4982 || | || || | |||||| || || || ||||| ||| |||||||| || | ||| Sbjct 22400 AACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACA 22341 Query 4983 TGAGATATAAAGTACTGTTCGTCAGGCTT---AAGTTTTTTCCAGTGGGGCAAATCTTTA 5039 |||||||||||||| |||| ||| || | | || ||||| | | | | ||||||| Sbjct 22340 TGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGGATATCTTTA 22281 Query 5040 GTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAA 5099 | ||||||| || ||| |||||||||| || || || ||||||||||||||| ||| Sbjct 22280 GACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATGCCAT 22221 Query 5100 A--TATCAGG 5107 | ||||||| Sbjct 22220 ATCTATCAGG 22211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427018710301355