Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq643 695 0.0 seq1878 197 2e-45 >seq643 Length=60608 Score = 695 bits (770), Expect = 0.0 Identities = 1401/2064 (68%), Gaps = 47/2064 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || |||||||| |||| |||||| | | |||||||| |||||||| || ||||||| Sbjct 39639 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCGGTTTTTAAG 39580 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || | ||||||| |||||||| ||||| | |||| | | || || | Sbjct 39579 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 39520 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||||||||| ||||| ||||| || || || || | |||||| ||||| | || Sbjct 39519 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 39460 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||||| || | || ||||||| |||||| | | | ||| || || |||||| Sbjct 39459 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 39400 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 |||| |||| ||||| || || ||||| ||||| || ||| || || | |||| | Sbjct 39399 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 39340 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || || | | ||| | | || | || | ||||| || |||||||| ||||| Sbjct 39339 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 39280 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | || || | || | ||| |||||| ||||||||| || | | | ||||| ||| Sbjct 39279 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 39220 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||||| ||| || |||||||| || || || | ||| ||||| | || ||| Sbjct 39219 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 39160 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 | | || |||| | | |||| | | | ||||||||| | |||| |||| ||| || Sbjct 39159 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 39100 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGT 77378 || | ||||||||| || || | || || || | || || || || | Sbjct 39099 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 39040 Query 77379 CCTTCTGTTTCAGCTAGTTCACAACTC--GCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436 ||| | ||| |||| ||| ||| | | | ||| | | ||| || ||||| | Sbjct 39039 CCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 38982 Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAA 77496 | |||| || ||||||| || ||| || | || || || | | ||| | || Sbjct 38981 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 38922 Query 77497 AGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTT 77556 | ||||||||| || |||||||| | | | || |||| || | |||| | Sbjct 38921 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATTGCTCTTAC 38862 Query 77557 TAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTA 77616 |||||| || | |||||| ||||||| || || |||||||| ||||| ||||| || | Sbjct 38861 GAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACAA 38802 Query 77617 CTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC-----TAT-AACAAACA 77670 | | | || || | ||||| |||||||||| | ||| ||| |||| | Sbjct 38801 CCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATAGG 38742 Query 77671 TGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTA 77730 | |||||||| ||||| | ||||||||| || || |||| | | |||| | Sbjct 38741 TCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTCAA 38682 Query 77731 TTATCTCGGTACATAGATTA---CTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCT 77787 || |||||||| |||||| |||| |||||| || ||||||| ||| ||||||| Sbjct 38681 CAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCTCT 38625 Query 77788 TTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGA 77847 ||||||| |||| || || || || ||||| || || || ||||| | |||| ||||| Sbjct 38624 TTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGA 38565 Query 77848 TAATAGATTTCCAGACGACTCTAGCTTTTAT--CATAG-ATTTGTATCGCCTCTCTCTT- 77903 | || || | ||| |||||||| | |||| | || || |||| || ||| Sbjct 38564 TTATTGAGTACCA--------TAGCTTTTGTGCCATAATAGTTCTACGGCCTTTCCCTTC 38513 Query 77904 ----TCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCA 77957 ||||| || |||| |||| ||||||||||| || | |||||| | | ||| Sbjct 38512 TTGTTCATACTTTTCATATAAAGCC--TCAAATTCATCGCCATACACATCAGCTAGACCA 38455 Query 77958 GGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAG 78017 || |||||| |||||||||| | ||| ||||||| || | ||||| ||||||||| Sbjct 38454 GGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAG 38395 Query 78018 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTA 78077 |||||||||||||| || ||| |||||||| || | | | |||||| || || | Sbjct 38394 AGATCAGGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGA 38335 Query 78078 TTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCC 78137 || || || ||||| ||||| | ||||| | |||||||| || | |||||| || Sbjct 38334 TTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCG 38275 Query 78138 ATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACT 78197 | |||| || || |||||||| || ||||| | ||||||||| || ||||| | ||| Sbjct 38274 AATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACT 38215 Query 78198 CTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTT 78257 | | ||| || | |||||| || || ||||||||||||| | |||||| || | Sbjct 38214 CGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTC 38155 Query 78258 GCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAA 78317 |||||||| | ||| || || || || || || | ||||| || | ||||||| Sbjct 38154 GCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAA 38095 Query 78318 CGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377 |||||| ||||||||||| || || ||||| || || |||| | || | ||| || Sbjct 38094 GTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCAT 38035 Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437 ||| | |||| || ||| || || ||||| || || || ||||||||||| Sbjct 38034 GAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAG 37975 Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATT 78497 |||| | || | |||||| || || || ||||| ||||| ||||| ||| |||||| Sbjct 37974 TATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATT 37915 Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557 || || || |||||||| | |||||| || || | || || | |||| ||| | Sbjct 37914 CCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCG 37856 Query 78558 AACAAG-TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTC 78616 || ||| |||||| |||||| ||| || || |||||||| | ||| |||||||| || Sbjct 37855 AAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATC 37796 Query 78617 GTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC---CATGACAGT 78673 |||| || | ||||| || | | ||| | || ||||| | || ||| | | | Sbjct 37795 ATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACAT-AGATT 37737 Query 78674 AGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTC 78733 | || || || |||||| | |||||||| ||||| ||||| | | | ||| Sbjct 37736 TGCTG--ATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGA 37679 Query 78734 CATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGC 78793 | || | | ||| ||||||||||| |||||||||||||| |||||||| | ||| Sbjct 37678 GACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGC 37619 Query 78794 AGCTAGAATAGCATAATCAGGATG 78817 || |||||||| || || ||||| Sbjct 37618 TGCAAGAATAGCGTAGTCGGGATG 37595 >seq1878 Length=35555 Score = 197 bits (218), Expect = 2e-45 Identities = 588/913 (64%), Gaps = 62/913 (7%) Strand=Plus/Minus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 ||| ||||| |||||||| ||||| || ||||| |||||||| ||||| || || | Sbjct 23127 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 23068 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||| || ||||||||||| |||||||||||||| | || || | ||| | ||| Sbjct 23067 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 23008 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 ||| | |||| ||||||||||||||| || || ||||||| || Sbjct 23007 TAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTT 22948 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 ||| || | || ||| || || || || ||||| |||||||| || ||| || Sbjct 22947 CATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGC 22888 Query 48077 --ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAAC 48134 | || ||| || || | | || | |||| | | ||||||| ||| Sbjct 22887 TTGTGTGATAACATC-CTG-AACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAG 22830 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 | | ||| ||||| || || || ||||| || | ||| | |||||||||||| Sbjct 22829 AGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAG 22770 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 || || || | ||| | || ||||| || | |||||| || | || || || ||| Sbjct 22769 GTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTG 22710 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCG 48311 || ||||| || || || || ||||| || ||| | | ||| | | | ||| | Sbjct 22709 AAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTG 22650 Query 48312 TTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCA----------- 48360 | || ||||| || ||||| |||| ||| ||||| | |||||| | Sbjct 22649 TCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGT 22590 Query 48361 -------------------------------------TTGTTTCTATAGCATTAAAGAGA 48383 |||| || |||||||| || ||| Sbjct 22589 TAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGA 22530 Query 48384 -AAGtttttt-tCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441 ||||||||| ||| |||||| | ||||||||| |||||||| ||| |||| | Sbjct 22529 TAAGTTTTTTGAGCTTG--ATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAG 22472 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 |||| |||||||| || || |||||||| ||||| |||| || || | ||||| | Sbjct 22471 AGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCA 22412 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 | || | | ||| || || | | || ||||| || || || || || ||||||| Sbjct 22411 CTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAA 22352 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCAT 48618 | |||| ||||| ||||| ||| ||| | | | | | |||||||| || | Sbjct 22351 AGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGT 22292 Query 48619 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTAT 48678 ||||||||| || | ||| | || ||||| |||||||| |||||||| |||||||| | Sbjct 22291 GGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGT 22232 Query 48679 ACATATTCCATAT 48691 |||||| |||||| Sbjct 22231 ACATATGCCATAT 22219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694617264258400