Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq643 632 3e-176 seq1878 221 2e-52 >seq643 Length=60608 Score = 632 bits (700), Expect = 3e-176 Identities = 1395/2078 (67%), Gaps = 50/2078 (2%) Strand=Plus/Minus Query 75365 TTCTTATCCAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423 ||||| ||||| |||||||||| |||| ||||| | | |||||||| |||||||| Sbjct 39652 TTCTTGGTCAACGGTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACAT 39593 Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 || ||||||| || | ||||||| |||||||| ||||||| |||| | | Sbjct 39592 GCCGGTTTTTAAGCCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGT 39533 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 || || | ||||||||||| ||||| ||||| || || || || | |||||| Sbjct 39532 TGGGTCTTTCAAGTGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGC 39473 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||| | || ||||| || | || ||||||| |||||| | | | ||| || Sbjct 39472 AGCCATCTGAATTATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAAT 39413 Query 75604 ATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 || |||||| ||||| |||| ||||| || || ||||||||||| || ||| || Sbjct 39412 TTCGGCTGGAATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTT 39353 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || | |||| ||| || | || | | || | || | ||||| ||||| Sbjct 39352 CATGTTATCAGACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAAT 39293 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 |||||| ||||| | || || | || | ||| |||||| ||||||||| || | | | Sbjct 39292 TTGAAACTCTCCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACA 39233 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 ||||| ||| | ||||||| || || || ||||| || || || | ||| || Sbjct 39232 CTCATTAAATCCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCT 39173 Query 75841 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 75900 ||| | || |||| | || |||| | | |||| | | | ||||||||| | |||| Sbjct 39172 ATTCCGAAGGCCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGT 39113 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATA 75960 ||| ||| |||| | ||||||||| || || | || || || | || Sbjct 39112 AGGTGTAACGCCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTA 39053 Query 75961 TGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTC--GCCTCTAACGCACCGTAA 76018 || ||||| || || |||| |||| || |||| | || || | | | Sbjct 39052 AGTCTCGTATGTACCTAGTTTTTTGGCTAAGTC--AACTGAAGATGTTAGAGCTGCATGA 38995 Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078 || || ||||| || |||| || || |||| || || || || || || || | Sbjct 38994 TATATGGTTTCAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAG 38935 Query 76079 TGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTC 76138 | ||| | ||| |||||||||| || |||||||| | | | || |||| || | Sbjct 38934 CGCAAAGCCAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGT 38875 Query 76139 TTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGA 76198 |||| | |||||| || | ||| || ||||||| ||| || |||||||| ||| Sbjct 38874 AAATTGCTCTTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGA 38815 Query 76199 TTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT---TTTCCATCT 76255 || || || || || | | || || | |||||| |||||||||| || || || Sbjct 38814 TTCCTAACTACAACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCT 38755 Query 76256 ATCACAAACATATTAAG----AGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGC 76311 | | |||||| | ||||| ||||| | ||||||||| || || |||| | Sbjct 38754 GT-ATTAACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGG 38696 Query 76312 ATTGGCATATTGTATTATCTCCGTGCATAGATTA---CTACACTTGATAGTTCCAAGATT 76368 | | |||| | || || || || |||||| |||| |||||| || ||||| Sbjct 38695 AGATGAGTATTCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATT 38639 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 || ||| ||||||||||| ||||||| || || || || | ||| || || |||||||| Sbjct 38638 TTTTTGATTGCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTC 38579 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT-----ATTATAGATTTG 76483 | |||| |||||| || || | ||| |||||||| || |||| || Sbjct 38578 TGTTTGTGCTTCGATTATTGAGTACCA--------TAGCTTTTGTGCCATAATAG--TTC 38529 Query 76484 TATCGCTTCTCTCTT-----TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAA 76538 || || | || ||| ||||| | | |||||| ||||||||||| || | | Sbjct 38528 TACGGCCTTTCCCTTCTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACA 38469 Query 76539 CATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAA 76598 ||||| | | ||||||||||||| || ||||||| | ||| ||||||| || | || Sbjct 38468 CATCAGCTAGACCAGGACATTCACAAGGGCACATCAGGGTCCATTCACCATTTTTTTCAA 38409 Query 76599 CCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTT 76658 | | ||||||||||||||||||||||| || ||| |||||||| || | | | || Sbjct 38408 CTCTCTTCATAAAGAGATCAGGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTT 38349 Query 76659 CTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTT 76718 |||| || || ||| || || || |||||||| | ||||| | |||||||| | Sbjct 38348 CTTCTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCT 38289 Query 76719 CTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAG 76778 | | |||||| || | | ||||| || |||||||| || ||||| | ||||||||||| Sbjct 38288 CCAAATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAG 38229 Query 76779 TGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAA 76838 | ||||| | |||| | ||| || | ||| || || || | ||||||||||| | | Sbjct 38228 TATTATTGAAGACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGA 38169 Query 76839 TATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAG 76898 ||||| || || ||||| | |||| || ||| || || || || |||||| Sbjct 38168 TATAAGCACCTGTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAG 38109 Query 76899 AGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958 | || | ||| || |||||| || || ||||| || || |||||||| || |||| | Sbjct 38108 AAATCATAGCGCAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATAT 38049 Query 76959 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAG 77018 || | ||| || ||| | |||| || ||| || || ||| | ||||| | Sbjct 38048 CAATTAAAAAGCATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGG 37989 Query 77019 ATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT 77078 | ||||| || || |||| | || | |||||| || || || ||| | | ||| || | Sbjct 37988 AAGCATGCGTAAAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGT 37929 Query 77079 CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138 | ||| |||||||| |||||||||||||| | |||||| || || || || ||| | | Sbjct 37928 CATCTTGGTGAATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTT 37869 Query 77139 TATTATTTATTTTCAACAAG-TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197 ||| ||| | || ||| |||||| |||||| ||| || || |||||||| | ||| Sbjct 37868 TATCATTGA-GGCGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAA 37810 Query 77198 GAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATA 77257 |||||||| || |||| || | ||||| || | | | || || ||||| | Sbjct 37809 TTAAAGTCTCGATCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTT 37750 Query 77258 TC---CATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAG 77314 || ||| | | | | | || ||||||||| | | |||||||| ||||| ||||| Sbjct 37749 TCGTACAT-AGATTTGCTG--ATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAA 37693 Query 77315 TTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGAT 77374 | | | || | || | ||| ||||||||||| ||||||||||| || Sbjct 37692 TGGTAGAGATCAGAGACAACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAA 37633 Query 77375 ACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || ||||| | || || ||||| || ||||| ||||| Sbjct 37632 ACAGCTATGCGTGCTGCAAGAATAGCGTAGTCGGGATG 37595 >seq1878 Length=35555 Score = 221 bits (244), Expect = 2e-52 Identities = 594/915 (65%), Gaps = 60/915 (7%) Strand=Plus/Minus Query 46323 TGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCC 46382 || ||| ||||| ||||| || |||||||| ||||| |||||||| ||||| || || Sbjct 23130 TGCCATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCC 23071 Query 46383 TTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAA 46442 |||| || ||||||||||| |||||||| ||||| | || || || | ||| | Sbjct 23070 AGCCAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATT 23011 Query 46443 TCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACA 46502 |||||| | |||| ||||||||||||||| || ||| ||||||| Sbjct 23010 TCCTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGC 22951 Query 46503 ATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGAC 46562 ||||| || | || | || || || || || ||||| |||||||| || ||| Sbjct 22950 GTTCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGAC 22891 Query 46563 AGC--ATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTA 46620 || | |||| ||| || || | | || | |||| ||| |||||||| | Sbjct 22890 GGCTTGTGTGATAACATC-CTG-AACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAA 22833 Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680 || | | ||| ||||| || || |||||||| || | ||| | |||||||||| Sbjct 22832 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 22773 Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740 || || || |||| ||| | || || || || | |||||| || | || || || ||| Sbjct 22772 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 22713 Query 46741 GAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA 46800 || ||||| || || || || || || || ||||| | | ||| | | | || Sbjct 22712 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 22653 Query 46801 TT---ATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCA-------- 46849 || |||||||| | ||||| |||| ||||||||| | |||||| | Sbjct 22652 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 22593 Query 46850 ----------------------------------------TTGTTTCTATAGCATTAAAG 46869 |||| || |||||||| || Sbjct 22592 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 22533 Query 46870 AGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCT 46929 ||| | |||||| | | |||||| | || ||||| |||||||| ||| |||| Sbjct 22532 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 22473 Query 46930 GAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGT 46989 || || || ||||| || || |||||||| ||||| |||| || |||| |||||| Sbjct 22472 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 22413 Query 46990 ACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTCACTATTCCATCACTAGCAGCAAA 47048 || || | | ||| || || ||| | || ||||| || || || || || ||||| Sbjct 22412 ACTTCACTGCTAAACCGCTC-GACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAA 22354 Query 47049 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTC 47105 ||| || | ||||| ||||| ||| |||||| | | | | |||||||| || Sbjct 22353 AAAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATC 22294 Query 47106 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTT 47165 | ||||||||| || | ||| | || ||||| ||||| || || ||||| |||||||| Sbjct 22293 GTGGATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTT 22234 Query 47166 ATACATATTCCATAT 47180 ||||||| |||||| Sbjct 22233 GTACATATGCCATAT 22219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712881509179200