Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq1477 91.5 1e-13 >seq1477 Length=21063 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/156 (74%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 111175 GTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTAT 111234 |||||| ||||| ||||||||||| |||| |||||||||||| || |||| | Sbjct 16066 GTAAAAAGTAAAATACAAGACAAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTT 16125 Query 111235 GCGGGCAAACAATTGGAAGA--TTCTAAAACTATGGCCGATTATAATATACAAAAAGAAT 111292 || || |||||| | || || || || ||| | | || ||||| || |||||||||| Sbjct 16126 GCTGGAAAACAACTTGAGGACGGTCGAACACTTT--CTGACTATAACATCCAAAAAGAAT 16183 Query 111293 CTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 | ||||| || || || | ||||| || ||||||| Sbjct 16184 CGACACTCCACTTGGTCCTTCGTCTTCGTGGTGGCA 16219 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 ||||| ||||| |||| |||||||||||| | || | ||| ||||||||| | || Sbjct 16360 GACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAACAACTTGAG 16419 Query 111253 GAT--TCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111310 ||| || || | ||| | ||||| || || |||||||||||||| || ||| |||| Sbjct 16420 GATGGTCGAACATTAT--CTGATTACAACATTCAAAAAGAATCTACCCTTCATCTAGTTC 16477 Query 111311 TGCGTCTGCGCGGTGG 111326 | ||||| || ||||| Sbjct 16478 TCCGTCTTCGTGGTGG 16493 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 111124 ACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAA 111183 || |||||||| || ||| | ||| ||| | ||| || | | | | |||||| Sbjct 15737 ACTGGCAAAACTATAACCCTTGAAGTCGAATCATCTGATACTATCGACAATGTAAAAAGC 15796 Query 111184 AAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAA 111243 |||||| |||||||||||| | || || ||||| || | |||| || || || Sbjct 15797 AAAATTCAGGACAAAGAAGGCATCCCACCAGACCAACAGAGATTGATTTTCGCTGGAAAG 15856 Query 111244 CAATTGGAAGAT--TCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTAC 111301 || ||||| ||| | || ||| | |||| || ||||||||||||||||| || || | Sbjct 15857 CAGTTGGAGGATGGCCGAACACTTT--CCGACTACAATATACAAAAAGAATCCACTCTTC 15914 Query 111302 ATTTAGTGTTGCGTCTGCGCGGTGG 111326 | ||||| | ||| | |||||||| Sbjct 15915 ACTTAGTCCTACGTTTACGCGGTGG 15939 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||||||||| ||||| || ||||| || || | ||| ||| | Sbjct 16780 ATGCAGATATTTGTCAAAACATTGACTGGGAAAACAATAACTCTTGAAGTAGAATCTTCA 16839 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | | || ||| || || || |||||||| |||| || ||| Sbjct 16840 GATACAATAGACAACGTCAAAAGTAAGATCCAAGATAAAGAAGGTATTCCACCGGACCAA 16899 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | || | ||| || || ||| | |||||| ||| | |||||| || Sbjct 16900 CAAAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTTAACGATTACAAC 16959 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 |||||||| ||||| || || || |||||| | ||||| |||||||| Sbjct 16960 ATACAAAAGGAATCGACTCTCCACTTAGTGCTTCGTCTTCGCGGTGG 17006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421780689209560