Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1878 104 2e-17 >seq1878 Length=35555 Score = 104 bits (114), Expect = 2e-17 Identities = 304/465 (65%), Gaps = 20/465 (4%) Strand=Plus/Minus Query 23218 TTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTT 23277 |||||||| || || || ||| |||||||||| || ||||| || | || || |||||| Sbjct 23114 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 23055 Query 23278 TCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTT--- 23334 ||||| |||||||||||||| || ||||| || || | ||||| Sbjct 23054 TCCATGAAATCAAATGGATTTTTGACTTTGTATAC----TT---TGGAATTTCCTAACGA 23002 Query 23335 ----AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACC 23390 | ||| | |||||| || ||||| || || || ||||| | ||| || || Sbjct 23001 GAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCC 22942 Query 23391 TATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTT 23450 | ||| ||| | ||| ||| || ||| || ||| || || || | | | Sbjct 22941 GAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGT 22882 Query 23451 AATTATTT---GAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAA 23507 || | | ||||| ||| ||| | ||| | || |||| ||| | | Sbjct 22881 GATAACATCCTGAACAG--ACTGCTTAGAT-GGTCTGTGCTTCAAATGTGAAAAGAGGAG 22825 Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| ||||| || ||||||||||| || | ||| | ||| |||||||| |||| Sbjct 22824 ACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAG 22765 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627 || | ||| || |||||||| || | |||||| || | |||||| || || || || Sbjct 22764 GCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAA 22705 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGT 23672 || ||||| || || ||||| || ||||||||| |||||||| Sbjct 22704 TATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGT 22660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521449312109000