Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3947 91.5 2e-13 >seq3947 Length=15482 Score = 91.5 bits (100), Expect = 2e-13 Identities = 195/287 (68%), Gaps = 7/287 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||||||||| |||||||| || || ||||| | |||||| | || || Sbjct 8352 ATATGGCATATGTACAAAAAAGCCGAGGCATCTTTTTGGACTGCTGAGGAGATTGATTTG 8411 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || || | ||| ||| | || | || || | || || | || || Sbjct 8412 TCTAAAGATATTCACGATTGGAATAACCGTCTCAATGATGATGAACGATACTTTATATCT 8471 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC-G 116811 || ||||| |||||||| |||||| ||||| || || || || || || ||||||| | Sbjct 8472 CATGTGCTAGCCTTTTTTGCCGCCTCAGACGGGATTGTTAATGAAAACCTCGTCGAGCGG 8531 Query 116812 TTTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 ||| | ||| || |||||| | | ||||| | | ||| || || ||||| || | Sbjct 8532 TTTAG--CAGTGAAGTGCAGATTCCTGAGGCTAGATTCTTTTATGGATTTCAAATTATGA 8589 Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||| || | ||||| |||| |||||| | ||||| || ||| Sbjct 8590 TGGAAAATATCCACTCTGAAACTTATTCGCTTTTAATCGATACTTAC 8636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515179115946240