Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1089 82.4 5e-11 >seq1089 Length=20904 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| ||||| | | || || | ||| | ||| |||||| ||||| ||||||||||| Sbjct 5130 TCCACCGCGTAAACGTAGGACTAAGTGAAGAGTGGATTCTTTTTGTATATTGTAGTCGGA 5189 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || ||||||||||| || |||||||| | | ||| ||||| || Sbjct 5190 AAGTGTTCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAATCTCTGTTGGTCTGGTGG 5249 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGC--TTTAGATCGGCTATCGAATCGGTCGATTCG 34339 | || || ||||| || |||||| |||| || | | || | ||| | |||||| Sbjct 5250 GATGCCTTCTTTGTC--CTGAATTTTGCTTTTTACATTGTCGATAGTATCAGATGATTCG 5307 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGT 34365 || || | || || |||||||| || Sbjct 5308 ACTTCAAGGGTTATAGTTTTGCCAGT 5333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323047493373440