Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq125 513 2e-140 seq3947 215 6e-51 >seq125 Length=45052 Score = 513 bits (568), Expect = 2e-140 Identities = 1361/2062 (66%), Gaps = 43/2062 (2%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||| ||||| ||||| ||||| | | |||||||| |||||||| || ||||||| Sbjct 28782 GTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACATGCCAGTTTTTAAG 28723 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | ||||||| |||||||||||| |||| |||| | | || ||| | Sbjct 28722 CCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGTTGGGTCTTTCAAG 28663 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || |||||||| || || ||||| || || || || | || |||||||| | || Sbjct 28662 TGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAGCAGCCATCTGAATT 28603 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || || |||| || ||||||| ||||| || | | ||||| || |||||| Sbjct 28602 ATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAATTTCGGCTGGAATA 28543 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 |||| |||||||||| || || ||||| || || | ||| || || | |||| | Sbjct 28542 TTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTTTCATGTTATCAGAC 28483 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 ||||| | || | | || | || | || || || | ||| || ||||| Sbjct 28482 CATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAATTTGAAACTCTCCT 28423 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | || || | || | ||| |||||| |||||| || || | |||||||| ||| Sbjct 28422 GCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAACACTCATTAAATCCA 28363 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 | ||||||| || ||| || ||||| || || || | ||| ||||| | ||| || Sbjct 28362 AGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGCTATTCCGAAGGCCA 28303 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNN 62582 || | || |||| | | |||| | ||||||| ||| | || | ||| ||| Sbjct 28302 TAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTGTAGGTGTAACGCCC 28243 Query 62583 NNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGT 62642 ||||| || ||| | |||| || || | || || || |||| Sbjct 28242 CACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGTAAGTCTCGTATGTA 28183 Query 62643 CCTTCCTTCTCAGCTAGTTTACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCAA 62700 ||| || | |||| | ||||| | || || | | ||| |||||||||| Sbjct 28182 CCTAGTTTTTTGGCTAAGT--CAACTGAAGATGTTAGAGCTGCATGATATATGGTTTCAA 28125 Query 62701 AGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAA 62760 |||||| || || |||| || ||| || || || ||||| | || | || Sbjct 28124 AGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAAGCGCAAAGCCAAAA 28065 Query 62761 ACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 62820 || | || |||| |||||||| || | | | || |||| || | ||| | || Sbjct 28064 ACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATT-GCTCTTA 28006 Query 62821 C-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATT 62879 | |||||| || | |||||| ||||||| ||| || |||||||| ||||| || || | Sbjct 28005 CGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTACA 27946 Query 62880 ACTTTGACC-ACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC-----TATTA-CAAA 62932 || | ||| ||||| | |||||| |||||||||| ||| ||||| || | Sbjct 27945 ACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 27887 Query 62933 CATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTG 62992 | ||| || | ||||||| |||||| || || || |||| | | | |||| Sbjct 27886 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 27827 Query 62993 TATTATCTCAGTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACT 63049 | || || || ||||||||| |||| |||||| || | ||||| |||||| || Sbjct 27826 AACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAGATTTTTTTGATTGCT 27770 Query 63050 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 63109 |||||| ||||| ||||| || || || || || || ||||||||||| | || | ||| Sbjct 27769 CTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTC 27710 Query 63110 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT-T 63168 || || | | ||| | | | ||| || |||| || || |||||| ||| | Sbjct 27709 GATTATTGAGTACCATAGCTTTTGTGCC---ATAATAG--TTCTACGGCCTTTCCCTTCT 27655 Query 63169 CGTATAGAGT----ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGA 63224 || | | | ||| || || || || || || | |||| | | | |||| Sbjct 27654 TGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATCAGCTAGACCAGGA 27595 Query 63225 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63284 |||||| || ||||||| | ||| || || | | | |||| |||||||||||| Sbjct 27594 CATTCACAAGGGCACATCAGAGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGA 27535 Query 63285 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343 ||||| |||||||| || ||| |||||||| | || | | ||| || || || ||| Sbjct 27534 TCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATT 27476 Query 63344 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63403 || || ||||||||| | | ||||| | ||||| || ||||| ||||| || | Sbjct 27475 TTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAA 27416 Query 63404 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63463 |||| || || || || || || ||||| | ||||| || || ||||| | |||| Sbjct 27415 TGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCG 27356 Query 63464 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGC 63523 | ||| || | |||||| ||||| | ||||| || || | |||||| | || | || Sbjct 27355 GAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATATAAGCACCTGTCGC 27296 Query 63524 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63583 ||||| | ||| || || || || || || ||||||| || | ||||| Sbjct 27295 GCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAATCATAGCGCAAGT 27236 Query 63584 TTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643 ||| || || || ||||| || || || ||||| || |||| | || || ||| || Sbjct 27235 TTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAATTAAAAAGCATGA 27176 Query 63644 AGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63703 ||| | ||| | | ||| || || ||||| ||||| ||||| |||||||| | Sbjct 27175 AGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAGCATGCGTAAAGTA 27116 Query 63704 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63763 ||| | || | |||||| || ||||| ||||| || || || || ||| |||||||| Sbjct 27115 TTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCATCTTGGTGAATTCC 27056 Query 63764 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAA 63823 || ||||||||||||| ||| || || || | || |||||||| | || | || Sbjct 27055 AACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTATCATTGA-GGCGAA 26997 Query 63824 CAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63882 ||| || ||| |||||| ||| || || |||||||| | ||| ||||||||| || | Sbjct 26996 GAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTAAAGTCTCGATCAT 26937 Query 63883 AAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATC---CATGGTAATAC 63939 ||| || | ||||| |||| | | | || || |||| | || ||| | | | Sbjct 26936 AAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCGTACATAGATTTGC 26877 Query 63940 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCA 63999 | || || ||||| |||||||||||| ||||| ||||| | | | | ||| | Sbjct 26876 T---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGGTAGAGATCAGAGA 26820 Query 64000 TCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGG 64059 |||| | ||| ||||||||||| ||||||||||| || | ||||| | || | Sbjct 26819 CTACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACAGCTATGCGTGCTG 26760 Query 64060 CTAGAATGGCATAATCCGGATG 64081 | ||||| || || || ||||| Sbjct 26759 CAAGAATAGCGTAGTCGGGATG 26738 >seq3947 Length=15482 Score = 215 bits (238), Expect = 6e-51 Identities = 592/913 (65%), Gaps = 62/913 (7%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| ||||| ||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 9260 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9201 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 ||| || |||||||||||||||||||| ||||| | || ||||| | ||| | ||| Sbjct 9200 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 9141 Query 33398 CAATTCAGAAATCAA-TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456 || ||| || || |||||| |||||||| || || ||||||| | Sbjct 9140 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 9082 Query 33457 TCATTCCTATGAGTTTAAC---TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATA 33513 |||| || |||| | | ||| || || |||| |||||||||||||| || | Sbjct 9081 TCATGCC---GAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGA 9025 Query 33514 CCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAA 33573 | || | ||| |||| | ||| | | | | ||| || |||||| || Sbjct 9024 CGGCTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAA 8965 Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 | | | ||| || || || ||| || || ||||| | ||| | ||||||||||| Sbjct 8964 AGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAA 8905 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | || || || | ||| | || || || || | |||||| |||||||| || || || Sbjct 8904 AGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCAC 8845 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCT- 33751 || || ||||| || ||||||||||| || | ||| | | |||| | || | || Sbjct 8844 TGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTT 8785 Query 33752 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------TC 33803 ||| || ||||| ||||| || | ||| || || | |||||| | || Sbjct 8784 TGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATC 8725 Query 33804 GTT-----------------------------------------TCTATGGCATTAAAGA 33822 ||| || || ||||| || | Sbjct 8724 GTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAA 8665 Query 33823 GATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCG 33882 |||| |||||| | |||||| | ||||||||||| ||||| ||| |||| | Sbjct 8664 GATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCAG 8605 Query 33883 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 33942 | || || ||||| || || |||||||| || || |||||||||| | |||||||| Sbjct 8604 AGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCA 8545 Query 33943 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAA 34002 |||| | | ||| || || | | |||||||| || || || || ||| ||||||| Sbjct 8544 CTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAA 8485 Query 34003 ACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCAT 34059 | || | ||||| |||||| ||| ||| || | | | ||||||||||| | Sbjct 8484 AGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGT 8425 Query 34060 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 34119 ||||||||||| | ||| | || || | |||||||| |||||||| || ||||| | Sbjct 8424 GAATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGT 8365 Query 34120 ACATATTCCAGAT 34132 |||||| ||| || Sbjct 8364 ACATATGCCATAT 8352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629768600190720