Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq3947 161 1e-34 >seq3947 Length=15482 Score = 161 bits (178), Expect = 1e-34 Identities = 580/901 (64%), Gaps = 61/901 (7%) Strand=Plus/Minus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 |||||||| |||| |||| |||||| || |||||||| || || ||| || |||||| Sbjct 9247 TTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGCCAAAGAGATATTT 9188 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699 ||||| ||||||||||||||| ||||| | | ||||| | |||| | || Sbjct 9187 TCCATGAAATCAAATGGATTT-TTGACTTTGTATACTTTGGAATTTCCTAACGAGAGGAG 9129 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 | || ||| |||| || || || || || ||| | | ||||| || | ||| Sbjct 9128 AAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGTTCATGCCGAGTAG 9069 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 || | | |||| |||||||| |||||| || || | | | |||| Sbjct 9068 AGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGGCTTGTGTGATAAC 9009 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 | || | || ||||| || | || | |||| ||| | | ||| ||||| Sbjct 9008 ATCCTGAACAGACTGCTTAGATGGTCTGTGCTTCAAATGTGAAAAGAGGAGACAAGCAAA 8949 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 || || ||||| || || | |||||||||||| ||||| |||| || | ||| Sbjct 8948 GTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAAGGTTAGGCCAGCCAT 8889 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999 ||| |||||||| || |||||||| || | |||||| || || || ||||||||||| Sbjct 8888 CAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACTGAAAAATATTCCCTC 8829 Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCATT 14058 ||||||||||| |||| | |||| |||||| | | | ||||| | || ||||| Sbjct 8828 CACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCTTTGTCTTGA-ATCCAAC 8770 Query 14059 TTCTAGCCCATTCAGAtttttttttAATAAAA--TCCATTGTTTCAATAGC-ATTA---- 14111 ||||| ||||| ||||| |||||| || | | || || || | |||| Sbjct 8769 GGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAATCGTTAACGATTATCGC 8710 Query 14112 AAT--------AAAT----ATTCCTTCTC------------------------TTTAGTA 14135 || |||| ||| ||| || ||| | Sbjct 8709 GATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAAAGATAAGTTTTTTGAG 8650 Query 14136 CTTGA-----AATGTATGTATCAATAAGTAAGC-TATACATTTCAGAGTGTATGTTTTCC 14189 ||||| ||||| ||||| || | |||| ||| |||||||||| || |||||| Sbjct 8649 CTTGATCTTTTATGTAAGTATCGATTA-AAAGCGAATAAGTTTCAGAGTGGATATTTTCC 8591 Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAAT 14249 || || ||||| ||||||||| ||||||| || | || ||||| | ||| Sbjct 8590 ATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGCACTTCACTGCTAAAC 8531 Query 14250 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA--ATATGT 14307 | ||| | | ||||||||||| || || || || |||||||| || | | ||| Sbjct 8530 CGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGA 8471 Query 14308 TTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTTTTCCAATCGGATAAATCCTTAG 14364 | ||||||||| | || |||| |||| | || ||||||||| | ||| |||| Sbjct 8470 GAT--ATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCGTGAATATCTTTAG 8413 Query 14365 AAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATA 14424 | | ||| | || ||| | ||||||||| || | |||||||| ||||| ||||| Sbjct 8412 ACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTGTACATATGCCATA 8353 Query 14425 T 14425 | Sbjct 8352 T 8352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479690677161600