Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq125 569 3e-157 seq3947 178 2e-39 >seq125 Length=45052 Score = 569 bits (630), Expect = 3e-157 Identities = 1381/2075 (67%), Gaps = 43/2075 (2%) Strand=Plus/Minus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||| | ||| | || |||||||| |||| ||||| || | |||||||| |||||||| Sbjct 28795 TTCTTGGTCAACGGTGAACTGAATAGGAGCAGATGCAGCCATAGTACGTAGGTAGTACAT 28736 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGC 70906 ||| ||||||| || | ||||||| |||||||||||| |||| |||| |||| Sbjct 28735 GCCAGTTTTTAAGCCTAATTTCCATCCAGCAAAATGCATACTTGTTATTTTGCCCATAGT 28676 Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966 | || || | |||||||||||| ||||| ||||| || || || || | || | Sbjct 28675 TGGG-TCTTTCAAGTGAATATTCATTGACTGTGACTGATCAATAAATGCACCACGATCAG 28617 Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026 ||||||| | || || || |||| || ||||||| ||||| || | | |||| Sbjct 28616 CAGCCATCTGAATTATGGTGCGCTGTGAGATCTCCCAAACTGTTTTGTAGAGTGCTTTAA 28557 Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTT 71083 | || |||||| |||| |||||||||| || || ||||| | || || | ||||| Sbjct 28556 TTTCGGCTGGAATATTTGATATATTCTGAATAGAGCCTCCATCAGATATGATGCGATTTT 28497 Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143 | || | ||| |||||| | || | | || | || | ||||| || | Sbjct 28496 TCATGTTATCAGACCATAAGCCCATATCTACCAGATCTTTGAGTAACCAGGGATTTACAA 28437 Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203 |||||| ||||| | || || | || | ||| |||||| |||||| || || | Sbjct 28436 TTTGAAACTCTCCTGCTAAAACACGGCGTGAGTATATATTAGAGGTATATGGCTCAAAAC 28377 Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGAC 71263 |||||||| ||| | ||||||| || ||| || ||||| || || || | || | Sbjct 28376 ACTCATTAAATCCAAGAATTTGACTTGTACTTGCGGTTGGCATTGGGGCTACGAGTAAGC 28317 Query 71264 TATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 |||| | ||| |||| | |||| | | |||| ||| ||||||| ||| | || | Sbjct 28316 TATTCCGAAGGCCATAAATCCTAATTTCAGCCTTTAAAGAATCCCAATCCCATAAGTCTG 28257 Query 71324 ATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCAT 71383 ||| ||| || | ||| || || | | Sbjct 28256 TAGGTGTAACGCCCCACATATCGTATTGAAGCTCACCCATCGAGGCGGGGGAGCCCTCGT 28197 Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTC--GCCTCTAATGCTCCATA 71441 | || ||||||| ||| ||||| ||||| ||| ||| | || ||| ||| Sbjct 28196 AAGTCTCGTATGTACCTAGTTTTTTGGCTAAGTCA--ACTGAAGATGTTAGAGCTGCATG 28139 Query 71442 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501 ||| |||||||| || |||| || ||||||| || ||| || || || ||||| | Sbjct 28138 ATATATGGTTTCAAAGATCTGTTTGTTGAGATGTTTTGCCTCTGGAGAGTCGAATGGCAA 28079 Query 71502 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCT 71561 || | |||| | ||||||| |||||||| || | | | || |||| ||| | Sbjct 28078 GCGCAAAGCCAAAAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCG 28019 Query 71562 CTTATTAGAAATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 71620 ||| | || | |||||| || | |||||| ||||||| ||| || |||||||| | Sbjct 28018 TAAATT-GCTCTTACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCA 27960 Query 71621 GATTTCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC- 71678 |||| || |||| || | ||| ||||| | |||||| |||||||||| | ||| Sbjct 27959 GATTCCTAACTACAACCT-GACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCA 27901 Query 71679 ----TATTACAAACACGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732 ||||| | | | || ||| || | ||||||| ||||||||| || || |||| Sbjct 27900 GCTGTATTA-ACATAGGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATC 27842 Query 71733 AGCATCGGCATATTGTATAATTTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAA 71789 | | | |||| | |||||| || ||||||||| |||| ||| || || | Sbjct 27841 CGGAGATGAGTATTCAACAATTTCGGTACAAAGATTAGAGCTACG---GATAGTCCCGAG 27785 Query 71790 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGT 71849 ||||| |||||| |||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 27784 ATTTTTTTGATTGCTCTTTTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGT 27725 Query 71850 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-TTCTT-- 71906 ||| | || | ||| || || | | ||| | | | ||| || ||| |||| Sbjct 27724 TTCTGTTTGTGCTTCGATTATTGAGTACCATAGCTTTTGTGCC---ATAATAGTTCTACG 27668 Query 71907 GTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966 | | || |||| ||| || | | |||||| || || || || || | ||| Sbjct 27667 GCCTTTCCCTTCTTGTTCATACTTTTCATATAAAGCCTCAAATTCATCGCCATACACATC 27608 Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026 ||| |||||||||||| || ||||||| | ||| || |||| | | |||| Sbjct 27607 AGCTAGACCAGGACATTCACAAGGGCACATCAGAGTCCATTCACCATTTTTTTCAACTCT 27548 Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCT 72085 ||||||||||||||||| |||||||| || ||| |||||||| | | | | || | Sbjct 27547 CTTCATAAAGAGATCAGGTATCCAAAGGGC-ATAGAATAGATCACGTGCACGAACTTCTT 27489 Query 72086 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 72145 | || || ||| || || ||||||||| | | ||||| | ||||| || |||| Sbjct 27488 CTTTGCCGTGATTTTTGCGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCA 27429 Query 72146 AGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 72205 | ||||| || | ||||||| || || || || || ||||| | ||||| || || | Sbjct 27428 AATATATAGCGAATGCTCCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTAT 27369 Query 72206 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 72265 |||| | |||| | ||| || | ||||||||| || ||||| || || | ||||| Sbjct 27368 TATTGAAGACTCGGAGCATCGGTACAATACCATTTGAGTTTCCATTTGTTCCTGCGATAT 27309 Query 72266 AGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325 | || | || ||||| ||| || || || || || || ||||||| | Sbjct 27308 AAGCACCTGTCGCGCGAATCCGATGAATATTTAAGCCAATACCACCGGCATTTTTAGAAA 27249 Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 72385 | | ||||| ||| || ||||| ||||| || || |||||||| || |||| | || Sbjct 27248 TCATAGCGCAAGTTTTCAAAGTATCGTAGATTCCATCAATACTATCCTCTTTCATATCAA 27189 Query 72386 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445 || ||| || ||| | ||| | ||| || || ||||| ||||| |||| Sbjct 27188 TTAAAAAGCATGAAGAGAGTTGAGATTGTGGAGTACCGGCTGCAAATAGAGTAGGGGAAG 27129 Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCC 72505 | |||||||| |||| | |||| |||||| || ||||| ||||| ||||| || || Sbjct 27128 CATGCGTAAAGTATTTATTGGACATTAGATTATAAGTCTCTATAGCAGATTCAATGTCAT 27069 Query 72506 ATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGT 72565 ||| || ||||| || ||||||||||||| |||||| || || | || || || || | Sbjct 27068 CTTGGTGAATTCCAACAGCGACACGCATTATCATATGTTGTGGCCGCTCCACAATTTTAT 27009 Query 72566 TATTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624 ||| | || ||| || ||| |||||| ||| || || |||||||| | ||| | Sbjct 27008 CATTGA-GGCGAAGAAGATATGATCTTTCCAGAGTCTTGAAGCCAAAATACTGGTAATTA 26950 Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATC- 72683 |||||||| || |||| || | ||||| || | | | | || || |||| | || Sbjct 26949 AAGTCTCGATCATAAACTATCGCGGAATTAAGCTCAGCTTCATGCTTCATAACAGTTTCG 26890 Query 72684 --CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 72741 ||| | | || || || ||||| |||||||||||| ||||| ||||| | | Sbjct 26889 TACATAGATTTGCT---GATCATTGGAGATATTTTCCCATTTTTTGGATTTACATAATGG 26833 Query 72742 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 72801 | | ||| | |||| | ||| ||||||||||| ||||||||||| || || Sbjct 26832 TAGAGATCAGAGACTACTTGAGAAAAGGCTTTTTTTGTTTGTTTGTGTAGATTAGAAACA 26773 Query 72802 GCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||||| | || || ||||| || || || ||||| Sbjct 26772 GCTATGCGTGCTGCAAGAATAGCGTAGTCGGGATG 26738 >seq3947 Length=15482 Score = 178 bits (196), Expect = 2e-39 Identities = 585/914 (64%), Gaps = 64/914 (7%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||||| ||||| || ||||| || |||||||||||||| |||||||| || | Sbjct 9260 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9201 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 ||| || |||||||||||||||||||| ||||| | || || || | ||| | ||| Sbjct 9200 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGAATTTCC 9141 Query 41881 CAATTCAGAAATCAA-TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 || ||| || || |||||| | |||||| || || ||||||| | Sbjct 9140 TAACG-AGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCGT 9082 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || ||| || || |||| |||||||||||||| || ||| | Sbjct 9081 TCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACGG 9022 Query 42000 CGTCTGTTATAATA----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTA 42055 | | ||| |||| | || | |||| || || ||| | |||||| | Sbjct 9021 CTTGTGTGATAACATCCTGAACAGACTGCTTAGATGGTCTGTGCTTC----AAATGTGAA 8966 Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 || | | ||| || || || ||| || || || || | ||| | |||||| ||| Sbjct 8965 AAGAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAA 8906 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || || | ||| | || || || || | |||||| || || ||||| || ||| Sbjct 8905 AAGGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCA 8846 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACT 42234 || || ||||| || ||||| ||||| || | ||| | | |||| | || | || Sbjct 8845 CTGAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGTTGTCCAAATGTCGACTCT 8786 Query 42235 --GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA-------T 42285 ||| || ||||| ||||| || | ||| || || | |||||| | | Sbjct 8785 TTGTCTTGAATCCAACGGACGGCCCAGTCAGACTTTTTCTTAATACAAGGTACTATGAAT 8726 Query 42286 CGTT-----------------------------------------TCTATGGCATTAAAG 42304 |||| || || ||||| || Sbjct 8725 CGTTAACGATTATCGCGATAGTGTGGGAAATGGGAATTACTTGTCTCGATAGCATTGAAA 8666 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 ||||| |||||| | |||||| | || |||||||| ||||| ||| |||| Sbjct 8665 AGATAAGTTTTTTGAGCTTGATCTTTTATGTAAGTATCGATTAAAAGCGAATAAGTTTCA 8606 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 || || || ||||| || || |||||||| || || |||| ||||| | || ||| Sbjct 8605 GAGTGGATATTTTCCATCATAATTTGAAATCCATAAAAGAATCTAGCCTCAGGAATCTGC 8546 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 ||||| | | ||| || || | | ||||| || || || ||||| ||| |||||| Sbjct 8545 ACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAACAATCCCGTCTGAGGCGGCAAAA 8486 Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAAT-TTATTCCAATCA 42541 || || | ||||| |||||| ||| ||| || | || | ||||||||||| Sbjct 8485 AAGGCTAGCACATGAGATATAAAGTATCGTTCATCATCATTGAGACGGTTATTCCAATCG 8426 Query 42542 TTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTA 42601 | ||||||||||| | ||| | || || | |||||||| ||||| || || ||||| Sbjct 8425 TGAATATCTTTAGACAAATCAATCTCCTCAGCAGTCCAAAAAGATGCCTCGGCTTTTTTG 8366 Query 42602 TACATATTCCAGAT 42615 ||||||| ||| || Sbjct 8365 TACATATGCCATAT 8352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671086985370240