Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1089 107 2e-18 >seq1089 Length=20904 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||| ||||| | ||| ||||||||||| | ||| |||||| | | ||| ||| || Sbjct 4081 CACTAAGTGGAGAGTCGATTCCTTTTGTATGTTGTAATCGTTAAGAGTACGTCCATCTTC 4140 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || ||||| ||||||| |||||||| || || || |||||||||||||| || | Sbjct 4141 AAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGGTCCGGTGGAATACCTTCTTTATCTTG 4200 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || |||||| | | | || || | || || |||| || || ||||| Sbjct 4201 GATCTTACTTTTGACGTTGTCTATTGTATCTGAAGATTCTACTTCAAGAGTTATTGTTTT 4260 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| | ||||| ||||| |||||||||| Sbjct 4261 CCCAGTCAATGTTTTGACAAATATCTGCATGC 4292 Score = 107 bits (118), Expect = 2e-18 Identities = 137/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||||||| | || ||||| ||||| | |||||| || | |||||| || |||| Sbjct 4871 ACCAAGTGGAGTGTCGATTCTTTTTGGATGTTATAGTCAG--AAAGTGTTCGACCGTCCT 4928 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || |||||||| |||| |||| |||||| ||||| || ||||| ||||||||||| | Sbjct 4929 CAAGTTGTTTTCCAGCAAAAATTAGTCTTTGTTGATCGGGTGGAATTCCTTCTTTGTCTT 4988 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||||| || || | ||| ||||||| ||||| || | |||||||||| Sbjct 4989 GTATTTTACTTTTTACATTGTCGATGGTGTCAGACGACTCGACCTCTAGAGTGATGGTTT 5048 Query 94977 TTCCAGT 94983 ||||||| Sbjct 5049 TTCCAGT 5055 Score = 89.7 bits (98), Expect = 5e-13 Identities = 90/115 (78%), Gaps = 4/115 (3%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 |||||||| ||||| | ||| ||||| ||| |||| || |||||| || ||||| | Sbjct 4607 GTAGATTCTTTTTGAATGTTGTAATCAG--ATAATGTTCGACCATCCTCAAGTTGTTTGC 4664 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 | |||||||||||||||| ||||| || ||||| ||||| ||||| | ||||| Sbjct 4665 CAGCAAAGATTAATCTTTGTTGATCGGGTGGAATTCCTTCCTTGTCCTGTATTTT 4719 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || ||||| | ||| ||||| ||||| | || || ||| | |||||| | ||||| Sbjct 5149 ACTAAGTGAAGAGTGGATTCTTTTTGTATATTGTAGTCGG--AAAGTGTTCGGCCATCCT 5206 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| ||||| | || || ||||| || || ||||| || || ||||||||||| | Sbjct 5207 CCAACTGCTTTCCAGCGAAAATCAATCTCTGTTGGTCTGGTGGGATGCCTTCTTTGTCCT 5266 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||| || || | ||| ||| |||| ||||| |||| || || |||| Sbjct 5267 GAATTTTGCTTTTTACATTGTCGATAGTATCAGATGATTCGACTTCAAGGGTTATAGTTT 5326 Query 94977 TTCCAGTAA 94985 | ||||||| Sbjct 5327 TGCCAGTAA 5335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448256322944640