Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1089 105 6e-18 seq359 82.4 7e-11 >seq1089 Length=20904 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||||||| | ||||| | || | || || ||||||||||| | || ||| Sbjct 5055 ACTGGAAAAACCATCACTCTAGAGGTCGAGTCGTCTGACACCATCGACAATGTAAAAAGT 4996 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 || || ||||||||||| || || ||||||||||||||||| |||| | || ||| Sbjct 4995 AAAATACAAGACAAAGAAGGAATTCCACCCGATCAACAAAGACTAATTTTTGCTGGAAAA 4936 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| || || | | ||| | ||||||||||| ||||||||||| || |||| Sbjct 4935 CAACTTGAGGACGGTCGAACACTTTCTGACTATAACATCCAAAAAGAATCGACACTCCAC 4876 Query 26973 CTGGTCCT 26980 ||||||| Sbjct 4875 TTGGTCCT 4868 Score = 104 bits (114), Expect = 2e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| ||| | || ||| | || |||| ||| ||||||||| || | || ||| Sbjct 4779 ACTGGTAAAACCATTACCCTTGAGGTAGAGTCATCCGACACCATTGATAATGTGAAAAGT 4720 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 || || ||||| ||||| || || ||||||||||||||| | || | | |||||| Sbjct 4719 AAAATACAGGACAAGGAAGGAATTCCACCCGATCAACAAAGATTAATCTTTGCTGGCAAA 4660 Query 26913 CAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCA 26971 ||||| || |||| | ||| | | | | || || |||||||||||||||||||| | || Sbjct 4659 CAACTTGAGGATGGTCGAA-CATTATCTGATTACAACATTCAAAAAGAATCTACCCTTCA 4601 Query 26972 TCTGGTCCT 26980 ||| || || Sbjct 4600 TCTAGTTCT 4592 >seq359 Length=25150 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| | || || ||| | || || | || | || ||| Sbjct 13800 ATGCAAATTTTCGTGAAAACCCTCACGGGTAAAACTATTACGCTTGAGGTGGAGTCATCG 13741 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| ||| || || || ||||| || || || || ||| Sbjct 13740 GACACCATCGACAATGTAAAATCAAAAATCCAAGATAAGGAAGGCATTCCACCTGACCAA 13681 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | || ||||||||||| || | | | | ||||| ||| Sbjct 13680 CAACGTTTGATTTTTGCGGGAAAACAACTCGAGGACGGCCGGACATTGTCTGACTACAAC 13621 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 || ||||||||||||||| | ||||| || || | ||| | |||||| Sbjct 13620 ATCCAAAAAGAATCTACTCTTCATCTCGTACTTCGTCTTCGTGGAGGA 13573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478625160065280