Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq125 107 2e-18 >seq125 Length=45052 Score = 107 bits (118), Expect = 2e-18 Identities = 480/755 (64%), Gaps = 13/755 (2%) Strand=Plus/Minus Query 116241 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 116300 ||| ||||| || || ||||| || || | | ||||| || || | | ||| ||| Sbjct 28066 AAACACATCTGCTAGCCCTTGAACTCCCACAGCTATTGGTCGGTGGCGTAAATTGCTCTT 28007 Query 116301 TCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 116360 ||||| ||| ||||| |||| ||| || | |||| ||||| | || Sbjct 28006 ACGAGCTTCAGGCACAGGATAGTAATTAACATCAATGATTTTATTCAGATTCCTAACTAC 27947 Query 116361 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATA 116420 ||||| || |||||||| || | |||||||| | | || ||| ||||| Sbjct 27946 AACCTGACAGACATCATGAAGTTTGTGAAAATCAAAAGTATTATCAGCTGTATTAACATA 27887 Query 116421 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 116480 | || | || | || |||| |||||| |||| |||||| | | ||| || Sbjct 27886 GGTCGGCAAAGCTAGGGATGCCAAATTACAAACAGCCACTTCATCCGGAGATGAGTATTC 27827 Query 116481 TATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 116540 | |||||| ||||| | ||| || || || || || | || |||||||| ||| Sbjct 27826 AACAATTTCGGTACAAAGATTAGAGCTACGGATAGTCCCGAGATTTTTTTGATTGCTCTT 27767 Query 116541 TGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 116600 | | ||||| ||||| |||||||||||| | || || || || || ||||| | | || Sbjct 27766 TTTATTACATGCATCTTTGTAGAGCATAAAAGGGGTACCAGTTTCTGTTTGTGCTTCGAT 27707 Query 116601 AATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTT---GGCTCGCCCCTCCTCCT 116656 || | | ||||| | | | || || | | | | | || ||| || | | Sbjct 27706 TATTGAGTACCATAGCTTTTG----TGCCATAATAGTTCTACGGCCTTTCCCTTCTTGTT 27651 Query 116657 CGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCC 116715 | |||||| || | |||||||| || || || ||| | || | || || || Sbjct 27650 CATACTTTTCATATAAAGCCTCAAATTCATCGCCATACA-CATCAGCTAGACCAGGACAT 27592 Query 116716 TTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCT 116775 | | || || | |||| ||||| |||| | ||||| | |||||| ||||| || Sbjct 27591 TCACAAGGGCACATCAGAGTCCATTCACCATTTTTTTCAACTCTCTTCATAAAGAGATCA 27532 Query 116776 GGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGA 116835 || ||||| || || |||| ||||| || ||| ||||||| | || ||||| Sbjct 27531 GGTATCCAAAGGGCATAGAATAGATCACGTGCACGAACTTCTTCTTTGCCGTGATTTTTG 27472 Query 116836 CGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 116895 || | || | || || | ||||| |||||||| || |||| || | |||| || Sbjct 27471 CGGAGGTCGAGGAACTCAAATATATCGGCGTGCCATGGCTCCAAATATATAGCGAATGCT 27412 Query 116896 CCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGC 116952 ||| || | |||| | || | ||||| || || || || || || || ||| Sbjct 27411 CCCGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTATTATTGAAGACTCGGAGC 27352 Query 116953 ATTGGAATGATACCATCAGATTGGCCATTTGTCCC 116987 || || | ||||||| || | |||||||| || Sbjct 27351 ATCGGTACAATACCATTTGAGTTTCCATTTGTTCC 27317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613459469139840