Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq125 127 3e-24 >seq125 Length=45052 Score = 127 bits (140), Expect = 3e-24 Identities = 412/630 (65%), Gaps = 21/630 (3%) Strand=Plus/Plus Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||| |||||||| | ||| |||||||| | || ||||| || || || || || || Sbjct 27316 AGGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGC 27375 Query 111962 GCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGA 112015 | ||||| | |||| ||| ||||| |||| | |||| | ||| | || Sbjct 27376 CAGATATGTTGATCAAGGTGGTAATAAGCGTCC---GGGAGCATTCGCTATATATTTGGA 27432 Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075 |||||||||||| ||||| | |||||||| || | || || || || | || || Sbjct 27433 GCCATGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGA 27492 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | || ||| || ||||| |||| || || ||||| || |||||||| |||||||||| Sbjct 27493 AGTTCG-TGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGAAGAGAG 27551 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGAT 112193 |||| | | ||| | ||| |||| | || || | || | || ||||| | ||| Sbjct 27552 TTGAAAAAAATGGTGAATGGACTCTGATGTGCCCTTGTGAATG-TCCTGGTCTAGCTGAT 27610 Query 112194 GCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAG--TCGGGCG- 112250 | || || || ||||| || | || |||||| || ||||| | || || Sbjct 27611 GTGTATGGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGAAAGGCCGT 27670 Query 112251 ACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGAC 112309 | | | || || | | | | ||| | | || || | | ||||| || || Sbjct 27671 AGAACTATTATGGCA----CAAAAGCTATGGTACTCAATAATCGAAGCACAAACAGAAAC 27726 Query 112310 TGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 112369 |||||| || | |||||| |||||||| || ||||| ||||||| |||||||| ||| | Sbjct 27727 TGGTACCCCTTTTATGCTCTACAAAGATGCATGTAATAAAAAGAGCAATCAAAAAAATCT 27786 Query 112370 GGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 112429 || ||| || || || || ||||| ||||| | |||| || ||||| Sbjct 27787 CGGGACTATCCGTAGCTCTAATCTTTGTACCGAAATTGTTGAATACTCATCTCCGGATGA 27846 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489 |||||| ||||| | ||||| | ||| | || | ||||| || ||| || Sbjct 27847 AGTGGCTGTTTGTAATTTGGCATCCCTAGCTTTGCCGACCTATGTTAATACAGCTGATAA 27906 Query 112490 GACATTTGATTATGAAAAACTCCACGAAGT 112519 || ||||||| | | ||||| || || || Sbjct 27907 TACTTTTGATTTTCACAAACTTCATGATGT 27936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620694106241280