Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3947 141 1e-28 >seq3947 Length=15482 Score = 141 bits (156), Expect = 1e-28 Identities = 221/311 (71%), Gaps = 9/311 (3%) Strand=Plus/Minus Query 37399 TTGTTTCAATTGCTTTTAAGAGA-AAGttttttt--CTTCACTATCTGTTATATAAGTAT 37455 |||| || || || || || ||| ||||||||| ||| | ||| |||| ||||||| Sbjct 8685 TTGTCTCGATAGCATTGAAAAGATAAGTTTTTTGAGCTTGA---TCTTTTATGTAAGTAT 8629 Query 37456 CAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAA 37515 | |||| | ||| |||||||||| |||||||| || || ||||| ||||||| Sbjct 8628 CGATTAAAAGCGAATAAGTTTCAGAGTGGATATTTTCCATCATAATTTGAAATCCATAAA 8569 Query 37516 AACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAA 37575 | | ||||| |||| | || || || | ||||| || | | ||||||||||| Sbjct 8568 AGAATCTAGCCTCAGGAATCTGCACTTCACTGCTAAACCGCTCGACGAGGTTTTCATTAA 8509 Query 37576 CTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT 37635 | ||||| || || ||||| || || || |||| |||||| | || |||||||| Sbjct 8508 CAATCCCGTCTGAGGCGGCAAAAAAGGCTAGCACATGAGATATAAAGTATCGTTCATCAT 8449 Query 37636 --TTGATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCC 37692 |||| | || |||||||| | ||||||||| || ||||||| || ||| | |||| Sbjct 8448 CATTGAGACGGTTATTCCAATCGTGAATATCTTTAGACAAATCAATCTCCTCAGCAGTCC 8389 Query 37693 AAAAACTTGCC 37703 ||||| |||| Sbjct 8388 AAAAAGATGCC 8378 Score = 96.9 bits (106), Expect = 4e-15 Identities = 300/460 (65%), Gaps = 6/460 (1%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| ||||| |||||||| || || |||||| |||||||||| || ||||| || | Sbjct 9260 CATCACTCCGGCCTTTTGATAGTCACCTACTCGTTTTTCGAAAAAGTTAGTCTTCCCAGC 9201 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGA--TTAGATGTATTATATATAGTACTACAT 36989 | || ||||||||||| |||||||||||| || || | |||| | | | | | Sbjct 9200 CAAAGAGATATTTTCCATGAAATCAAATGGATTTTTGACTTTGTATACTTTGGA--ATTT 9143 Query 36990 GATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAG 37049 ||| ||||| | ||| ||||| ||||| ||||| | ||| || | Sbjct 9142 CCTAACGAGAGGAGAAGTCGATCTGCAACGAATTCGATGTACTGCTTCATCAGAGTGGCG 9083 Query 37050 TTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACA 37109 || || || | ||| ||| | || || |||||| || |||||| || Sbjct 9082 TTCATGCCGAGTAGAGCGCATGGCAGCGCTTCAGTTAGAAATTCTTGTTCTATCTCGACG 9023 Query 37110 GCATCTTTAACTATATTAACAATA-ACTTCTTCAGTTGGGGGATATTTTAAATATTTAAA 37168 || | | | | | || || | ||| ||| || ||| | || |||| | ||| Sbjct 9022 GCTTGTGTGATAACATCCTGAACAGACTGCTT-AGATGGTCTGTGCTTCAAATGTGAAAA 8964 Query 37169 CAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAA 37228 | | ||| ||||| || |||| ||||| || | || | ||| |||||||| Sbjct 8963 GAGGAGACAAGCAAAGTCCGTGTGTAGGCCTTCGTCACGTGAAATAAGTTCGTTAGAAAA 8904 Query 37229 GGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGA 37288 ||||| || | ||| || |||| ||| || | |||||| || | ||||| || ||| Sbjct 8903 GGTTAGGCCAGCCATCAACCCTCGTTTCTTCAACCAAAAAATGGAAGCAAAGGAACCACT 8844 Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT 37328 || || || || || ||||| ||||| |||||||||||| Sbjct 8843 GAAAAATATTCCCTCCACTGCAGCAAAAGCTACAAGACGT 8804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592270717752960