Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq125 266 8e-66 seq2258 100 7e-16 >seq125 Length=45052 Score = 266 bits (294), Expect = 8e-66 Identities = 539/798 (68%), Gaps = 9/798 (1%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 |||||||| ||||| ||||| ||| | | ||| | ||||| |||||| | || | Sbjct 26960 TATTTTGGCTTCAAGACTCTGGAAAGATCATATCTTCTTCGCCTCAATGATAAAATTGTG 27019 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || || || ||||| ||| | | ||||| || |||| ||||| | |||| ||| || Sbjct 27020 GAGCGGCCACAACATATGATAATGCGTGTCGCTGTTGGAATTCACCAAGATGACATTGAA 27079 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 ||| ||| || |||| || || | || || | || |||||| | ||||| Sbjct 27080 TCTGCTATAGAGACTTATAATCTAATGTCCAATAAATACTTTACGCATGCTTCCCCTACT 27139 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 |||||| || || ||| | ||| | |||| |||||| | | | || || Sbjct 27140 CTATTTGCAGCCGGTACTCCACAATCTCAACTCTCTTCATGCTTTTTAATTGATATGAAA 27199 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACT---GCTCTTATTTCTAAA 110600 || ||| |||||| || || || ||| || | ||| ||| ||| | ||||||||| Sbjct 27200 GAGGATAGTATTGATGGAATCTACGATACTTTGAAA---ACTTGCGCTATGATTTCTAAA 27256 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 || | || || ||||| | | ||||| |||||| | | ||| || |||||||| Sbjct 27257 AATGCCGGTGGTATTGGCTTAAATATTCATCGGATTCGCGCGACAGGTGCTTATATCGCA 27316 Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720 | | || || |||| ||| |||| || ||| | |||||||||| | ||||| Sbjct 27317 GGAACAAATGGAAACTCAAATGGTATTGTACCGATGCTCCGAGTCTTCAATAATACTGCC 27376 Query 110721 AAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCT 110777 | |||||| ||||||||||||| | | || |||| ||||| ||| | || || Sbjct 27377 AGATATGTTGATCAAGGTGGTAATAAGCGTCCGGGAGCATTCGCTATATATTTGGAGCCA 27436 Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837 ||||| | ||||||||||| ||| | || || || |||||||| || |||||| Sbjct 27437 TGGCACGCCGATATATTTGAGTTCCTCGACCTCCGCAAAAATCACGGCAAAGAAGAAGTT 27496 Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897 | ||||||||| |||| ||||| | ||||| | ||| | || ||||| | ||| || Sbjct 27497 CGTGCACGTGATCTATTCTATGCCCTTTGGATACCTGATCTCTTTATGAAGAGAGTTGAA 27556 Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATAT 110957 ||||||| ||| |||| ||||| ||| | | |||||||||| ||||||| ||| Sbjct 27557 AAAAATGGTGAATGGACTCTGATGTGCCCTTGTGAATGTCCTGGTCTAGCTGATGTGTAT 27616 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAA 111017 || | || ||||| | | || ||||| |||||| ||||||| || || | | Sbjct 27617 GGCGATGAATTTGAGGCTTTATATGAAAAGTATGAACAAGAAGGGAAAGGCCGTAGAACT 27676 Query 111018 ATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCT 111077 ||| || ||| | || |||| | ||| | ||| ||||| |||||||| || ||| Sbjct 27677 ATTATGGCACAAAAGCTATGGTACTCAATAATCGAAGCACAAACAGAAACTGGTACCCCT 27736 Query 111078 TATATTTTGTATAAAGAT 111095 | ||| | || |||||| Sbjct 27737 TTTATGCTCTACAAAGAT 27754 >seq2258 Length=7615 Score = 100 bits (110), Expect = 7e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352 |||||||||| || ||| | | || |||| ||||| || |||||||||||||| Sbjct 5554 TGATATTGTTGAGAGGCATCTAGAAGATGGTGATATTGTTCTCTTTAATAGGCAACCATC 5495 Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCG 305412 || ||||| | ||| ||| |||| | || || || | | || ||| | Sbjct 5494 CCTTCATAAGCTTAGTATCATGAGTCATTATGTAAAGGTTAGGCCATGGCGAACCTTTAG 5435 Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472 ||| || | |||| ||||||||||| ||||| || ||||||||||||||||||||| | Sbjct 5434 ATTGAACGAGTGTGCCTGTACGCCTTACAATGCAGACTTTGATGGAGATGAAATGAATCT 5375 Query 305473 GCATGTACCTCAA 305485 || ||||||||| Sbjct 5374 ACACGTACCTCAA 5362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186718157613264